Gene Information

Name : Riv7116_1320 (Riv7116_1320)
Accession : YP_007054432.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1682791 - 1683762 bp
Length : 972 bp
Strand : -
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence :
ATGACATCAGTTGTTTCGAGTTCTATCACAACTATTCGCATCGGTTCTCGTAAAAGCCAGCTCGCTCTTATCCAGACCTA
CTGGGTAAAGGAACAACTTTCTAAGAAGTTTCCTGATATCAAGTTTGAAGTTCACACCATGTCTACTAAGGGTGACAAAA
TCTTGGACGTGGCTTTAGCGAAGATTGGTGACAAAGCATTATTCACCAAAGAACTGGAATTGGGAATGATGAATCGGGAG
ATTGACTTTGCAGTTCATTCTCTGAAGGATTTACCTACTCGTTTACCAGAAGGATTGGGTTTAGCGGCAATTAGCGAAAG
AGAAAACCCAGCAGATGCTTTGGTTGTACATGAAAAGCACAAAGACAAGCAGATCGAAACTTTGCCTAAAGGCGCAGTTA
TTGGTACATCTTCCCTGCGACGCTTAGCACAGTTGCGGCATCATTTTCCTCACTTTGAGTTCAAAGATGTACGCGGTAAC
TTAAATACCCGTCTTGCCAAACTAGACTCCGGAGAATACGACGCTTTAATCTTGGCAGCAGCAGGTTTGGGACGCTTGGG
AATGGCAGAGCGCATACATCAAGTTATTCCCAAGGAAATATCCCTTCATGCAGTCGGACAAGGTGCATTGGGCATAGAAT
GTCTTTCCGACAACGAACAACTGATATCCTTGCTCAAAGAAGCAATCGAGCATCCTCAAACTCGCGATCGCTGTCTTGCA
GAAAGAGCTTTTCTAAGGGATTTAGAAGGCGGTTGTCAAGTACCTATCGGGGTAAATACCGAAATTAACGGCGACGAATT
GACCATGACGGGGATAGTTGCCAGTATCGATGGTACAAAGCGCGTTCAAGACACTGTAACTGGTTCTTTGTCCGATCCAG
AAAAATTAGGAAGCGAACTAGCACAGCGTTTGCGCGAACAAGGAGCGCAGGAAATCTTGGATGAGATTTTCGCTACTCTT
GAACGCGGGTAA

Protein sequence :
MTSVVSSSITTIRIGSRKSQLALIQTYWVKEQLSKKFPDIKFEVHTMSTKGDKILDVALAKIGDKALFTKELELGMMNRE
IDFAVHSLKDLPTRLPEGLGLAAISERENPADALVVHEKHKDKQIETLPKGAVIGTSSLRRLAQLRHHFPHFEFKDVRGN
LNTRLAKLDSGEYDALILAAAGLGRLGMAERIHQVIPKEISLHAVGQGALGIECLSDNEQLISLLKEAIEHPQTRDRCLA
ERAFLRDLEGGCQVPIGVNTEINGDELTMTGIVASIDGTKRVQDTVTGSLSDPEKLGSELAQRLREQGAQEILDEIFATL
ERG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-50 47
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-50 47