Gene Information

Name : Riv7116_1022 (Riv7116_1022)
Accession : YP_007054143.1
Strain : Rivularia sp. PCC 7116
Genome accession: NC_019678
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1305513 - 1306229 bp
Length : 717 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGACTAATACAATAATTCGTTTGGAAGATATTTTTAAAATTTACGGTAGCGGAATAACTGAGGTTAAAGCCCTTAATAA
TGTCAATTTGGTTGTAGAAGAAGGCGAATATTGCTCAATAATGGGACCTAGCGGTTCTGGTAAGTCTACAGCAATGAATA
TTATCGGCTGTTTAGATCGTCCCACATCAGGAAATTATTATTTAGATAATGTAGATGTGGCACAGATGGATGATACCCAA
TTAGCGCATATTCGCAATAAAAAATTAGGTTTCGTTTTCCAGCAGTTCCATTTATTACAGCAACTGACAGCCCTTGAAAA
TGTTATGCTACCAATGCTTTACGCTAGCGTACCTACTAATGAAAGAAGGGATAGGGGAATCGAAGCTTTAAAAAGAGTCG
GTTTAGAAAATCGTTTGAATAACAAACCAAATCAGCTATCGGGAGGGCAACAACAACGTGTAGCGATCGCCCGCGCAATT
GTTAATCGTCCAGTAGTACTTTTAGCCGATGAACCAACAGGGGCACTTGATTCGCGTACAACTCAAGAAGTTTTAGATAT
TTTTAGCGAACTAAATTCCACTGGAATCACCGTAGTTATGGTGACTCACGAACCAGAAGTAGCCAGCCAAACACAGCGTA
TTGTTTGGTTTCGCGACGGTGAAGTTATACACTCACATTTAACTCCAGATGATTTAAGTACCGTCGCTGTATCTTGA

Protein sequence : 
MTNTIIRLEDIFKIYGSGITEVKALNNVNLVVEEGEYCSIMGPSGSGKSTAMNIIGCLDRPTSGNYYLDNVDVAQMDDTQ
LAHIRNKKLGFVFQQFHLLQQLTALENVMLPMLYASVPTNERRDRGIEALKRVGLENRLNNKPNQLSGGQQQRVAIARAI
VNRPVVLLADEPTGALDSRTTQEVLDIFSELNSTGITVVMVTHEPEVASQTQRIVWFRDGEVIHSHLTPDDLSTVAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-23 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Riv7116_1022 YP_007054143.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-48 54
Riv7116_1022 YP_007054143.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-38 48
Riv7116_1022 YP_007054143.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-29 43
Riv7116_1022 YP_007054143.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-30 41