|
Name : Nos7107_0564 (Nos7107_0564) Accession : YP_007048387.1 Strain : Nostoc sp. PCC 7107 Genome accession: NC_019676 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 662036 - 664507 bp Length : 2472 bp Strand : + Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit DNA sequence : ATGTTTGAACGCTTCACAGAAAAAGCCATTAAGGTAATCATGCTGGCCCAAGAAGAGGCCCGCCGTTTAGGTCACAACTT TGTGGGAACCGAACAGATCCTCCTGGGTCTAATCGGGGAAGGCACAGGAGTTGCGGCCAAGGTGCTGAAATCAATGGGTG TCAATCTCAAAGATGCCCGTATTGAAGTAGAAAAAATCATAGGCCGGGGTTCAGGCTTTGTGGCCGTGGAAATTCCGTTT ACGCCACGGGCAAAGCGGGTTCTGGAACTATCCCTAGAAGAAGCGCGCCAATTAGGGCATAACTACATTGGCACCGAGCA TCTGCTGTTGGGCCTGATCCGGGAAGGGGAAGGTGTAGCAGCCAGGGTGCTAGAAAACCTTGGGGTGGATCTATCTAAGG TGAGAACCCAAGTCATCCGAATGCTGGGAGAAACAGCAGAGGTTTCGGCGACCGGGCAATCGGGACGCACTAAGACTCCT ACCTTGGATGAATTTGGCTCGAACCTAACCCAGATGGCGACGGACAATAAACTTGATCCAGTCGTAGGACGCGCGAAAGA AATTGAGCGTGTAATTCAAATCTTGGGTCGCCGGACAAAAAATAACCCAGTGCTGATTGGTGAACCAGGGGTTGGTAAAA CAGCGATCGCCGAAGGTCTGGCGAGCCGCATTGCCAACAAAGATGTCCCCGACATCCTGGAAGACAAGCGCGTAGTCACA CTAGATATTGGATTGCTGGTAGCAGGAACCAAATACCGGGGTGAATTTGAAGAACGCCTGAAAAAAATCATGGACGAAAT CCGTTCTGCGGGTAACGTCATTTTGGTGATTGATGAGGTACACACCCTAATTGGTGCAGGTGCAGCCGAAGGTGCGATCG ACGCAGCAAATATCCTCAAGCCAGCCTTGGCCAGAGGTGAATTGCAGTGTATCGGTGCCACCACCCTCGACGAATACCGC AAACACATCGAGCGCGATGCAGCCTTAGAACGCCGCTTCCAACCAGTAATGGTGGGTGAGCCATCAGTTGATGAAACTAT AGAAATATTGCATGGACTGCGCGATCGCTACGAGCAACATCACAAGTTGAAAATTTCTGATGAAGCTTTAATTGCAGCAG CGAAATTGTCTGACCGTTATATCAGCGATCGCTACTTGCCAGATAAAGCCATCGACTTGATTGATGAAGCAGGTTCGCGT GTGCGGTTAATCAACTCCCAACTGCCCCCCGCAGCCAAAGAGTTAGATAAAGAACTGCGCCAAATCTTAAAAGAAAAAGA TGATGCCGTGCGTTCCCAAGACTTTGACAGAGCCGGGGAACTGCGTGATCGGGAAATGGAAATTAAAGCCGAAATTCGGG CGATCGCTCAAAGCAAAACCAACGGTGCAAGTGGTGACGGTGTAGAACCCGTTGTTACCGAAGAAGACATTGCTCACATC GTTGCTTCCTGGACAGGTGTACCAGTGAACAAGCTCACCGAGTCTGAATCCGAGAAGCTGCTGCACATGGAAGACACCTT GCATCAGCGCCTCATCGGTCAAGAAGACGCTGTGAAAGCAGTTTCACGGGCAATCCGTCGGGCGCGTGTCGGTTTGAAAA ACCCCAACCGACCCATTGCCAGCTTTATCTTCTCCGGGCCAACTGGGGTAGGTAAAACTGAGTTGGCAAAATCCTTGGCT TCATACTTCTTCGGTTCCGAAGAAGCAATGATCCGCCTGGATATGTCGGAATATATGGAACGCCACACCGTCAGCAAACT AATTGGTTCGCCTCCTGGTTACGTTGGTTATAACGAAGGCGGTCAATTAACCGAAGCTGTGCGCCGTCGTCCTTATACCG TGGTGCTATTCGACGAAATCGAAAAAGCTCACCCCGATGTCTTCAATATGCTATTGCAAATTTTAGAAGACGGTCGGTTA ACTGATGCTAAAGGTCGCACCGTTGACTTCAAGAATACCTTGCTGATTTTGACATCCAACATCGGTTCCAAGGTAATTGA AAAAGGCGCTTCCACCATCGGCTTCGAGTTCACCGAAGATGCAGGCGAATCGCAATATAACCGCATTAAAACTCTGGTTA ACGAAGAACTCAAGCAGTACTTCCGCCCAGAATTTCTCAACCGTTTGGATGAAATTATCGTCTTCCGTCAACTCAACCGC GAAGAAGTCACCCAAATCGCCGATATCATGCTCAAAGAAGTCTTTGGTCGCCTGACAGAAAAAGGTATCACCTTAGAAGT CACCGAACGCTTCAAAGACCGCCTCATCCAAGAAGGCTACAGCCCAAGCTACGGTGCAAGACCGTTACGTCGGGCAATTA TGCGCTTGTTAGAAGATAGTCTAGCAGAAGAAATTCTGTCTGGTCGCATCAAAGATGGCGATACCGCCGTTGTTGATGTC GATGAAAACGGCACTGTCCAAGTTAGTTCTCAACAGCGCCGGGAGTTGTTACCTCAAGGAATTGAGTCATAA Protein sequence : MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAVEIPF TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGQSGRTKTP TLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDKRVVT LDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR KHIERDAALERRFQPVMVGEPSVDETIEILHGLRDRYEQHHKLKISDEALIAAAKLSDRYISDRYLPDKAIDLIDEAGSR VRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNGASGDGVEPVVTEEDIAHI VASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLA SYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRL TDAKGRTVDFKNTLLILTSNIGSKVIEKGASTIGFEFTEDAGESQYNRIKTLVNEELKQYFRPEFLNRLDEIIVFRQLNR EEVTQIADIMLKEVFGRLTEKGITLEVTERFKDRLIQEGYSPSYGARPLRRAIMRLLEDSLAEEILSGRIKDGDTAVVDV DENGTVQVSSQQRRELLPQGIES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nos7107_0564 | YP_007048387.1 | ATPase | VFG0079 | Protein | 0.0 | 60 |
| Nos7107_0564 | YP_007048387.1 | ATPase | VFG0080 | Protein | 2e-159 | 51 |
