Gene Information

Name : Nos7107_5070 (Nos7107_5070)
Accession : YP_007052735.1
Strain : Nostoc sp. PCC 7107
Genome accession: NC_019676
Putative virulence/resistance : Resistance
Product : small multidrug resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5924464 - 5924784 bp
Length : 321 bp
Strand : +
Note : COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: npu:Npun_R1626 small multidrug resistance protein; PFAM: Small multidrug resistance protein; SPTR: Small multidrug resistance protein

DNA sequence :
ATGATAAATAGTTGGCTTTATCTCATTGCAGCAATCTTATTTGAAGTTGCTGGTACAACTTCCATGAAATTATCTGAGGG
ATTTACCAGAACTATTCCCTCGGTTTTAATTTTTGTCTGTTATGGAATTTGTTTTAGTTTTTTAACATTAGCCCTCAAAA
AAATTGAAGTCAGCATTGCGTATGCTGTTTGGTCAGGTTTAGGAACAACTGTAATCGCTACTATTGGGGTGATTTGGTTT
CGTGAGTCGATGTCTCTGACCAAGTTTTTATCAATAGCTTTAATTATCATTGGCGTAATTGGGGTAAATTCTGCCAAATA
A

Protein sequence :
MINSWLYLIAAILFEVAGTTSMKLSEGFTRTIPSVLIFVCYGICFSFLTLALKKIEVSIAYAVWSGLGTTVIATIGVIWF
RESMSLTKFLSIALIIIGVIGVNSAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 1e-15 46
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 1e-15 46
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 1e-15 46
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 2e-15 46
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 1e-15 46
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-15 46
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-15 46
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-15 46
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-15 46
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-15 46
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 2e-15 46
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 1e-15 46
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-15 46
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 2e-15 46
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 1e-15 46
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 1e-15 46
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-15 46
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 1e-15 46
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 1e-15 46
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-15 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0323 Protein 6e-16 46
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0322 Protein 3e-17 45
Nos7107_5070 YP_007052735.1 small multidrug resistance protein NC_002695.1.913273.p Protein 7e-11 44
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0324 Protein 1e-15 44
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0150 Protein 7e-11 44
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0002 Protein 4e-14 43
Nos7107_5070 YP_007052735.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 4e-14 43
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0325 Protein 4e-11 43
Nos7107_5070 YP_007052735.1 small multidrug resistance protein CP004022.1.gene1549. Protein 4e-13 42
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0140 Protein 3e-13 42
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0321 Protein 2e-16 41
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0139 Protein 2e-13 41
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0192 Protein 1e-13 41
Nos7107_5070 YP_007052735.1 small multidrug resistance protein BAC0249 Protein 2e-08 41
Nos7107_5070 YP_007052735.1 small multidrug resistance protein AE000516.2.gene3301. Protein 2e-08 41