Gene Information

Name : Nos7107_4110 (Nos7107_4110)
Accession : YP_007051811.1
Strain : Nostoc sp. PCC 7107
Genome accession: NC_019676
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 4804132 - 4805817 bp
Length : 1686 bp
Strand : +
Note : TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313:IPR004365:IPR004364; KEGG: npu:Npun_R5202 lysyl-tRNA synthetase; PFAM: Amin

DNA sequence :
ATGTCGGAAGAAGATATCCGTGCCGCCAGGCTGGAAAAAGTAGCCCAGATTAAGCAGTTAGGGGGTAATCCATACTCCTA
TCGTTGGGAATCTAGCCATCATGCCGCCCAATTGCAAGAAAAATTTGCTGATTTAGCCAGTGGCGAAGAAGTTGATTTAG
AAGTTACCGTTGCCGGTCGCATCATGGCGCGGCGTGTTTTTGGTAAATTGGCATTCTTTACTTTGCAAGACGAAACAGGC
AACATACAGCTATATCTGGAGAAAAATCGCATCCAAGAAAGCATGGCAGAAATTGATGCTGATGCTTTCAACCACCTCAA
GCAACTCACAGATGCAGGCGATATTCTGGGAGTTAAAGGCACGATTAAACGGACTGAAAAGGGCGAGTTATCAGTCTACG
TCAAACAATACACCATCCTCACAAAATCCCTACTGCCCCTACCCGACAAGTGGCATGGATTAACAGATGTCGCCAAACGT
TACCGTCAGCGCTACGTTGACTTGATTGTTAACCCCGAAGTCCGGCAAACTTTTCGCCGTCGCGCCCAAATCACCGCAGG
TATTCGCCGTTATTTAGAACAGCGCGATTTTCTGGAAATTGAAACGCCTGTTTTGCAAAGTGAAGCTGGCGGTGCAGATG
CACGTCCTTTTGTCACTTACCACAACACCCTAGAAATGGAATTGTATCTGCGGATTGCCACAGAACTCCATCTCAAACGC
TTGATTGTCGGTGGTTTTGAAAAGGTGTTTGAATTAGGGCGAATTTTCCGCAATGAGGGAATTTCAACTCGACACAACCC
CGAATTTACCTCCATCGAAGTTTATCAAGCCTACGCCGACTACAACGATATGATGGCGCTGACGGAAGGAATTATTACCA
CCGTCGCCCAAGATGTACTTGGCACATTGCAAATCACCTACCAAGGCGAAACTGTAGATTTAACACCACCTTGGCGACGG
GTGACAATGCACGATGTAGTCAAAGAGGCCACAGGCTTAGACTTTAATGCTTTTTCAACCTTGGAAGAAGCAAAAGCCGC
AGCTAAAAATGCTGGAATTCCTGGTGCAGGTGAAGCCCAAAGTATAGGTAAAATCCTGAATTTAGTCTTTGAAGAGAAAG
TAGAAGCAAATTTAATTCAGCCTACCTTTGTTATTGACTATCCTGTAGAAATTTCGCCACTCGCAAAGCCCCACCGTTCT
CAACTTGGTTTGGTAGAACGATTTGAGTTATTCATTGTGGGACGCGAAACCGCCAATAGCTTCTCAGAATTAACAGATCC
CATTGACCAAAGAGAACGCCTAGAAGCCCAAGCCGCCCGCAAAGCTGCTGGTGATTTAGAAGCCCAAGGTGTAGATGAAG
ATTTTCTCACGGCGTTGGAATATGGAATGCCACCTACAGGCGGTCTAGGTATTGGGATTGATCGGTTAGTCATGTTATTA
ACTGATTCTGCCAGTATTCGAGATGTCATTGCTTTTCCCTTACTCAAACCTGAAGGTAGCTTGATTAAGGAATTTAGCTA
TGATCCAAAAACTCAAACACTCACGATTGAATTTGATAGCGGCAGTGTTTACGAATATTTCAAAGTACCTTCTAGTATCA
AAGAAGAATTATATAATGTACCGTCTAAAGGTCAATATTTTCATAAATTTATTAAAGGGAAATTTAAGTATGAACAATTA
AGTTGA

Protein sequence :
MSEEDIRAARLEKVAQIKQLGGNPYSYRWESSHHAAQLQEKFADLASGEEVDLEVTVAGRIMARRVFGKLAFFTLQDETG
NIQLYLEKNRIQESMAEIDADAFNHLKQLTDAGDILGVKGTIKRTEKGELSVYVKQYTILTKSLLPLPDKWHGLTDVAKR
YRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLEQRDFLEIETPVLQSEAGGADARPFVTYHNTLEMELYLRIATELHLKR
LIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMALTEGIITTVAQDVLGTLQITYQGETVDLTPPWRR
VTMHDVVKEATGLDFNAFSTLEEAKAAAKNAGIPGAGEAQSIGKILNLVFEEKVEANLIQPTFVIDYPVEISPLAKPHRS
QLGLVERFELFIVGRETANSFSELTDPIDQRERLEAQAARKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLL
TDSASIRDVIAFPLLKPEGSLIKEFSYDPKTQTLTIEFDSGSVYEYFKVPSSIKEELYNVPSKGQYFHKFIKGKFKYEQL
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 6e-108 48
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 3e-84 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7107_4110 YP_007051811.1 lysyl-tRNA synthetase VFG1668 Protein 4e-108 48