Gene Information

Name : Nos7107_3629 (Nos7107_3629)
Accession : YP_007051346.1
Strain : Nostoc sp. PCC 7107
Genome accession: NC_019676
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4216863 - 4217615 bp
Length : 753 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: npu:Npun_F4214

DNA sequence :
ATGTACACCAGTGAATCGACCAAGTATTCTGCCAGAGCAGATATCGGACACACAAGCCAGATTCTAGTGGTAGAAGATGA
AGAGTTAATCCAAGAGATGCTATCTGTAGCCTTGGAAGAGGAAGGTTATGGGGTTGTAACCGCCCCAGATGGGCGAGTGG
CGATTGAGTATCTCAAAAACTTTGAAGCCAACTCAGGCGAGTTTCCCTTTGATTTGGTAATTCTTGACTTGATGTTACCG
CAAATCAATGGTTTAGATATTTGTCGCTTGCTACGCCATCAAGGCAATCCAGTACCGATTTTAATGCTGAGTGCTAAGGG
TAGTGAAACCGATCGCGTGTTGGGTTTAGAAGTTGGCGCAGATGACTATCTCACCAAACCTTTTAGTATGCGGGAGCTAG
TGGCTCGGTGTCGCGCACTGCTGCGTCGTCAACGTTTAAGCACTTTACCGCAGCTACCAGTTCTGAAACACAAAGATGTT
ACCTTAAACCCCCAAGAATGTCGGGTGTTAGTACGAGGTCAAGAAGTAAATCTTTCCCCAAAAGAATTTCGGTTGTTGGA
ATTGTTTATGAGTTATGCTCGGCGAGTTTGGTCGCGGGAGCAGTTGCTAGATCAGGTCTGGGGGCCAGATTTCGTTGGGG
ATAGTAAAACTGTGGATGTTCACATTCGCTGGTTAAGAGAGAAGTTAGAGTTAGATCCTAGCCATCCTGAGTATATTGTG
ACTGTGAGAGGATTTGGCTATCGTTTCGGATAA

Protein sequence :
MYTSESTKYSARADIGHTSQILVVEDEELIQEMLSVALEEEGYGVVTAPDGRVAIEYLKNFEANSGEFPFDLVILDLMLP
QINGLDICRLLRHQGNPVPILMLSAKGSETDRVLGLEVGADDYLTKPFSMRELVARCRALLRRQRLSTLPQLPVLKHKDV
TLNPQECRVLVRGQEVNLSPKEFRLLELFMSYARRVWSREQLLDQVWGPDFVGDSKTVDVHIRWLREKLELDPSHPEYIV
TVRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-30 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 2e-35 47
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 1e-39 45
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 1e-42 44
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 5e-34 43
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 2e-35 43
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator CP001918.1.gene5135. Protein 6e-14 43
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-29 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 1e-33 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 2e-31 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator BAC0111 Protein 5e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator VFG1390 Protein 7e-32 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator VFG1563 Protein 3e-30 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-30 42
Nos7107_3629 YP_007051346.1 winged helix family two component transcriptional regulator VFG1389 Protein 2e-21 41