Gene Information

Name : Nos7107_3025 (Nos7107_3025)
Accession : YP_007050767.1
Strain : Nostoc sp. PCC 7107
Genome accession: NC_019676
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3532534 - 3534975 bp
Length : 2442 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit

DNA sequence :
ATGTTTGAACACTTCACTTCCGAAGCCATTAAGGTCATCATGTTAGCTCAGGAGGAAGCACGTCGCCTGGGACACAACTT
CGTAGGAACGGAACAAATTCTCCTGGGTTTAATTGGAGAGGGAACGGGAGTTGCTGCCAAAGTGCTGAGTGAGTTGGGCG
TTACCCTCAAAGAAGCACGACGCGAAGTAGAAAAAATTATTGGTAGAGGTTCTGGGTTTGTACCGCCAGAAATTCCTTTT
ACTCCTAAAGTAAAAAACCTCTTTGAGCAATCGTTTAAAGAAGCTCATGGTCTAGGACATAACTACATCAACACGGAACA
CTTGCTTTTGGGTCTAACTGAGGCGGGTGAAGGTGTTGCGGCTAAAGTGTTGCAAAATCTGGGGGTTGACCTCAGACTAG
TTCGGACTGCTGTTATGCGTCGTTTAGGCGAAGATGGCAATGTGACTGCGGGTGGTAATAGTCCACGGCGGAATCAACAA
GCACTCACCCTAGAAGAGTTTGGCAGAAATCTTAGCAAACTAGCACAAGAAGGCAAACTAGACCCGGTAGTTGGTCGAGA
AAAAGAAATTGAGCGTGCTATTCAAATTCTCGGTCGTCGCACGAAAAATAATCCTGTGTTGATTGGTGAACCAGGAGTTG
GTAAAACTGCGATCGCCGAAGGTTTAGCACAACGGATTGTGAACCAAGATGTTCCTGAACTCTTGTTGAATAAACAAGTT
ATCAGCCTAGATATGGGCTTAGTAGTAGCAGGAACTCGCTTTCGTGGCGACTTTGAAGAACGCCTGAAAAAAATCATGGA
CGAAATCCGTTCCGTCGGTAACATCGTCCTGGTAATTGATGAAATTCATACCCTTGTGGGTGCTGGTGGTACAGAAGGCG
GTTTAGATGCAGCCAACATCCTCAAACCAGCTTTAGCACGAGGTGAACTCCAGTGTCTTGGTGCCACCACCCTGGATGAA
TACCGCAAGCATATCGAACGCGATGCGGCTTTAGAAAGACGTTTCCAACCTATTTTGGTGGGTGAACCTTCCGTTGAAGA
AACCATCCAAATTCTTTACGGCTTGCGTGGTGCTTACGAACAGCATCACAAAGTAGAAATTACTGATGCGGCTGTGTTAG
CAGCAGCCCAGTTGTCAGATCGTTATATTAGCGATCGCTTCTTGCCAGATAAAGCCATAGACTTAATTGACGAAGCTGGT
TCTCGTGTCCGGTTGCGGAACTCGCAAATTTCCGCCAACAAGGAACTCAAGCGTCAACTGGTAAGTGTGACCAAGGCTAA
ACATGAAGCCGTTAGACTCCAAGACTTTGACAAAGCAGGTGAACTCCGCGACCAAGAATTAGAAATTGAAGCTCAGTTAC
ATACAGAGCAAACTATTTCTATTCCCACTGTTGGCGAAGAAGACATTGCTCAAATTGTCGCCTCTTGGACTGGTGTCCCC
GTCAACAAACTCACAGAATCTGAGTCTGAGTTGTTGTTACACCTGGAAGACACCCTGCATCAACGACTAATTGGTCAAGA
ACAAGCCGTTACCTCTGTCTCTCGCGCTATCCGCCGTGCCAGAGTTGGGTTAAAGAATCCCAACCGTCCTATTGCCAGCT
TTATCTTCTCCGGCCCCACAGGAGTTGGTAAAACCGAATTGGCTAAAGCCTTAGCAGCTTATTTCTTCGGTGCAGAAGAA
GCAATGATTCGCTTGGATATGTCGGAATTTATGGAAAGCCATACCGTATCTAAGCTGATTGGTTCTCCTCCTGGTTACGT
CGGCTACGATGAAGGCGGTCAACTGACTGAAGCTGTGCGACGCAAACCATACACAGTGTTGCTGTTCGACGAAATCGAAA
AAGCACACCCTGATGTTTTCAACATGTTGTTGCAAATCTTGGATGACGGTCAACTTACCGATGCAAAAGGTCGGCGGGTA
GACTTCAAGAATACTTTGATCATCCTGACTTCTAACATCGGTTCTAAAGTGATTGAAAAAGGTGGCGGTGGTTTAGGTTT
TGAATTTGATAATCAAGCCGAGGCTAGTTATCATCGCATTCGCAACTTAGTGAATGAGGAACTGAAAACTTACTTCCGTC
CAGAATTCCTTAACCGATTGGATGAGATTATTGTCTTCACTCAATTGTCTAAAGATGAAGTCAAGGAAATTGCTGAGATT
ATGCTCCGTGATGTTGCTAACCGCTTGACGGAAAAAGGTATCACCTTGGAAGTTACGGAAGCGTTTAAAGAACTTGTCGT
CAATGAAGGTTATAACCCTAGCTATGGTGCTAGACCTTTACGCAGGGCAATTATGCGCCTGTTAGAAGATTCTTTAGCGG
AAGCACTACTGTCTGGCGAAATCAGCAATGGTGATGCTGCTATTGCCGATGTAGATGATGATGGTCAAGTTAAAATCCGC
AAGTCAGATACGCGTGAATTACTCTTGGCAAATGCTCGCTAA

Protein sequence :
MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLSELGVTLKEARREVEKIIGRGSGFVPPEIPF
TPKVKNLFEQSFKEAHGLGHNYINTEHLLLGLTEAGEGVAAKVLQNLGVDLRLVRTAVMRRLGEDGNVTAGGNSPRRNQQ
ALTLEEFGRNLSKLAQEGKLDPVVGREKEIERAIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPELLLNKQV
ISLDMGLVVAGTRFRGDFEERLKKIMDEIRSVGNIVLVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCLGATTLDE
YRKHIERDAALERRFQPILVGEPSVEETIQILYGLRGAYEQHHKVEITDAAVLAAAQLSDRYISDRFLPDKAIDLIDEAG
SRVRLRNSQISANKELKRQLVSVTKAKHEAVRLQDFDKAGELRDQELEIEAQLHTEQTISIPTVGEEDIAQIVASWTGVP
VNKLTESESELLLHLEDTLHQRLIGQEQAVTSVSRAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKALAAYFFGAEE
AMIRLDMSEFMESHTVSKLIGSPPGYVGYDEGGQLTEAVRRKPYTVLLFDEIEKAHPDVFNMLLQILDDGQLTDAKGRRV
DFKNTLIILTSNIGSKVIEKGGGGLGFEFDNQAEASYHRIRNLVNEELKTYFRPEFLNRLDEIIVFTQLSKDEVKEIAEI
MLRDVANRLTEKGITLEVTEAFKELVVNEGYNPSYGARPLRRAIMRLLEDSLAEALLSGEISNGDAAIADVDDDGQVKIR
KSDTRELLLANAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7107_3025 YP_007050767.1 ATPase VFG0079 Protein 0.0 58
Nos7107_3025 YP_007050767.1 ATPase VFG0080 Protein 2e-154 54