Gene Information

Name : Nos7107_2655 (Nos7107_2655)
Accession : YP_007050405.1
Strain : Nostoc sp. PCC 7107
Genome accession: NC_019676
Putative virulence/resistance : Virulence
Product : helix-turn-helix domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3084543 - 3084779 bp
Length : 237 bp
Strand : +
Note : PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: shw:Sputw3181_3764 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family

DNA sequence :
ATGGACGAAGCTAAAATACTTTCTTTATTGGGTGAGAATCTTAGAAGAATCAGGATAGAAAAAGGTTATAGCCAAGAGCA
ACTTGCTGCTCTTACTGGTTTAGATCGAACCTATATAAGTGGCATAGAAAGAGGAAAAAGAAATGTTAGTTTAATAAATT
TGGTTAAATTGGCTAGAGCGTTAGATATTCCCACTAAACAAATCGTGGATTTTGATATGGAGGGGAACAATGTCTAG

Protein sequence :
MDEAKILSLLGENLRRIRIEKGYSQEQLAALTGLDRTYISGIERGKRNVSLINLVKLARALDIPTKQIVDFDMEGNNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 0.050 41
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 0.035 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nos7107_2655 YP_007050405.1 helix-turn-helix domain-containing protein VFG2175 Protein 0.014 41
Nos7107_2655 YP_007050405.1 helix-turn-helix domain-containing protein VFG2168 Protein 0.014 41