Gene Information

Name : Cyagr_0382 (Cyagr_0382)
Accession : YP_007044917.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Virulence
Product : metal ion ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 401986 - 403008 bp
Length : 1023 bp
Strand : -
Note : PFAM: Periplasmic solute binding protein family

DNA sequence : 
ATGCCCCAGCACCGCCGTGACGGCCAGGGCCACGCCGAGGTCCCTCGGCACCCCCTCAAGCAGGCCGTGGTGGCCGCCGC
CCTGATGGTCCCCCTGCTGGGGGCTGGCTGCACCCCCGGGCCCCAGAGCGGCGGCACGTCCCCCGCACCGTCGATGACGG
GGGCGGCCCCGGGGGCCAGCGAGAGCGCCGGGGTCCGGGACGAACGACCCCTGGTGCTCACCACGTTCACGATCCTGGCG
GACATGGCCCGCCAGGTGGCGGGAGAGCGGGTGCGGGTGGAATCGATCACCCGGCTGGGAGCCGAGATCCACGGCTACGA
GCCCACCCCCAGCGACCTGAAGCGGGCCTCGGGGGCCCAGATGGTGCTGGAGAACGGCTTCGGGCTGGAGCGCTGGGCCC
AGCGCTTCTACGCCGGCCTTCCCGACGTGCCCCACGTGACCCTCACCGAGGGCATCACACCCCTGCCGATCGCCGGCGAC
GCCTACCAGGGCAAGCCCAACCCCCACGCCTGGATGTCCCCTCGGCTAGCCAAGGTCTATGTGAAGAACATCCGCCGCGC
CCTCACCCGGCTCGACCCCGCCGGGGCCGCCACCTTCCAGCGCAACGCTGAGCGCTACAGCGCCGAACTGGACGCCCTCG
ACAGGGAACTGCGGACCTCCCTGGCCCGGATCCCCCCCGCCCAGCGGGTGCTGGCCACCTGCGAGGGGGCCTTCTCCTAT
CTCGCCCGCGACTACGGCCTCACCGAGGCCTACCTGTGGCCGGTGAACGCCGAATCCCAGGTCACCCCCCAGCGCATGGC
CCGCCTGATCGCCCTGGTGAAGGAGCGCCGGGTGCCGGCGGTGTTCTGCGAGAGCACGGTCAGCGCCGAGCCCCAGAAGC
AGGTGGCGAAGCAGTCGGGGGCCCGCTTCGGCGGCGTGTTCCACGTGGATTCGCTCTCCCTGCCTGACGGCCCGGCCCCC
AATCTCCTGGAGCTGCAGCGTCATAACGTGGAGACCCTGCAAGCGGGTCTGGCGGGGAGCTGA

Protein sequence : 
MPQHRRDGQGHAEVPRHPLKQAVVAAALMVPLLGAGCTPGPQSGGTSPAPSMTGAAPGASESAGVRDERPLVLTTFTILA
DMARQVAGERVRVESITRLGAEIHGYEPTPSDLKRASGAQMVLENGFGLERWAQRFYAGLPDVPHVTLTEGITPLPIAGD
AYQGKPNPHAWMSPRLAKVYVKNIRRALTRLDPAGAATFQRNAERYSAELDALDRELRTSLARIPPAQRVLATCEGAFSY
LARDYGLTEAYLWPVNAESQVTPQRMARLIALVKERRVPAVFCESTVSAEPQKQVAKQSGARFGGVFHVDSLSLPDGPAP
NLLELQRHNVETLQAGLAGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-71 53
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-71 53
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-71 53
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-71 53
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-72 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_0382 YP_007044917.1 metal ion ABC transporter substrate-binding protein BAC0349 Protein 5e-72 53
Cyagr_0382 YP_007044917.1 metal ion ABC transporter substrate-binding protein BAC0439 Protein 1e-69 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_0382 YP_007044917.1 metal ion ABC transporter substrate-binding protein VFG0525 Protein 5e-72 53