Gene Information

Name : join (Cyagr_2638)
Accession : YP_007047074.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2556268 - 2557490 bp
Length : 1223 bp
Strand : -
Note : PFAM: Integrase core domain; Transposase; manually curated; non-canonical start codon

DNA sequence :
ATGACCAACCCAACCAAGACTCGGCGCCGATTCACGGCGCAGCAGAAGGTGGAGGCCGTGGAGCTCTGCCTGCAGGAGGG
CCTCTCCTGCAATGCCGTGGCCCAGCGGCTTGGCCTTCCCTCCAGCAGCCTCGCTCGCTGGGTGAGGCAGGCCCGCATGG
ATCGCGGCCAGGCCGGACCCAGGGACCAGGGCCTGCTCAGCAGTGAGGAGCGCGCTGAACTCAGCCGGCTCCGCAAGGAG
AACCGCGAGCTCAGGAGGGAGAAGGATTTTTTCAGGCTGGCGGCAGCGCACTTTGCCAAGGAGCAGCTGCCGCCGAGAGG
TTTCGCCTGATCGACCAGCTCGCTGATCAGCATTCCATCTCCTGGCTGTGCCGGCAACTGGGCGTGGCCCGCAGTGGGTT
CTACGCCTGGCGGCAGCGGCACGAGGCGCCGGGAAAGCGAGCGGCTGAGAACGCCCGACTCACCGCTGAGATCCAGGCGG
TGTTCGGCGAGCACCGGGGCTTCTACGGCTCGCCTCGGATCCACCAGGAACTGCGCGCAGCCGGCCACCCGGTGGGACGC
CACCGTGTCGCTCGGCTCATGCGTCGTGCCGATCTGCGGGCCAGGACCCGAAAGGCGTTCCGGCCCTGCAGCAGGGCCAG
CAGCGGAGCCGCTGGGGTGGCGGAGAACCTGCTGCAGCAGGACTTCCAGCCCCCGGCCCCGAACCGCTGCTGGGCCGGCG
ACATCACCTACATCCGCACCAGCGCCGGCTGGCGATACCTGGCGGTGTGGATCGATCTGTTCAGTCGCCGTGTGGTGGGT
TGGACGCTGAATCAACGCATGGATGCCGCCCTGGTGATCGAGGCCCTCAACCGGGCCCTCGGCCACCGGCAGGTGGAGCC
GGAGCAGCTGCTGATCCACACGGATCAGGGCAGCCAGTACCGGGCCAGCGACTACCGCGACCGGCTGGCCAAACACGGGA
TCCTCTGCAGCATGTCCGCCAAGGGATGCTGCTGGGACAACGCGGTGGTGGAGAGCTTCTTCTCCACCCTCAAATTGGAA
CTGGACCTCGATGACGATCGGGCAGTCCTAATTTCACCGCAGCAGCTGCAGCGCGATCTGGCCTTCTGGATCGAGGGCTA
CTACAACCGCGAGCGCCGCCATTCAACGGTCGGTTACCTGAGCCCGATCGACTACGAGCAGCGGTTCATCGCTGCATCTA
CACTCACCTTTGTGACCCCCTGA

Protein sequence :
MTNPTKTRRRFTAQQKVEAVELCLQEGLSCNAVAQRLGLPSSSLARWVRQARMDRGQAGPRDQGLLSSEERAELSRLRKE
NRELRREKDFFQAGGSALCQGAAAAERFRLIDQLADQHSISWLCRQLGVARSGFYAWRQRHEAPGKRAAENARLTAEIQA
VFGEHRGFYGSPRIHQELRAAGHPVGRHRVARLMRRADLRARTRKAFRPCSRASSGAAGVAENLLQQDFQPPAPNRCWAG
DITYIRTSAGWRYLAVWIDLFSRRVVGWTLNQRMDAALVIEALNRALGHRQVEPEQLLIHTDQGSQYRASDYRDRLAKHG
ILCSMSAKGCCWDNAVVESFFSTLKLELDLDDDRAVLISPQQLQRDLAFWIEGYYNRERRHSTVGYLSPIDYEQRFIAAS
TLTFVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-35 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-39 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-39 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-38 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-35 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-35 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
join YP_007047074.1 transposase VFG1631 Protein 3e-35 44