Gene Information

Name : Cyagr_2218 (Cyagr_2218)
Accession : YP_007046672.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2147363 - 2148883 bp
Length : 1521 bp
Strand : -
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
TTGTCGGATCTGCGTGAGACCCGTCTGGAGAAAGCCCGCAGCCTGGAGGCCCTGGGACGGGCTCCCTATGCCCTCGGCTT
CGCCCCCAGCCACCGCACCGCCGAGCTGCAGCAGGCCCATGCCGACCTGCCCAACGGCGAGGAGCGGGCGGTGGCGGTGG
CGGTGGCCGGGCGGGTGATGACCCGGCGGGTGATGGGCAAGCTGGCCTTCTTCACCATCGCCGACGAATCCGGCCCGATC
CAGCTGTTCATCGAGAAGGCCGCCCTGCTGGCGGCCCACCCGGAGGAGCCCGAGGCTTTCGCCCAGATCACCTCCCTGGT
GGACGGCGGCGACTGGATCGGGGTGCACGGCAGCCTGCGCCGCACCGACCGGGGCGAGCTCTCGGTGAAGGTGAGCGACT
GGGTGATGCTCTCCAAGGCGCTCCAGCCCCTGCCCGACAAGTGGCACGGCCTGGCGGACGTGGAGAAGCGCTACCGCCAG
CGCTACCTGGATCTGATCGTCTCGCCCCACACCCGCGAGACTTTCCGGCGCCGGGCCCGGCTGGTGAGCGCCATGCGCCG
CTGGCTCGACGAGCGCGACTTCCTCGAGATCGAGACGCCCGTCCTGCAGACCGAAGCCGGCGGCGCCGATGCCCGCCCCT
TCGCCACCCATCACAACGCGCTCGACCTGCCCCTCACCCTCCGCATCGCCACCGAGTTGCACCTCAAGCGGCTGGTGGTG
GGGGGCTTCGAGCGGGTCTACGAGCTGGGGCGCATCTTCCGCAACGAGGGGGTGAGCACCCGCCACAACCCTGAGTTCAC
CTCGGTGGAGATCTACCAGGCCTTCGCCGATTACCACACGATGATGGACCTCACCGAGCAGCTGCTGGCCGCGGCCTGCC
TCGAGGTCTGCGGCGACACCCGGATCACCTACCAGGGCGCCGAGATCGACCTCACCCCGCCCTGGCGGCGGGTCACGATG
CACGAGCTGGTGGAGCAGGCCACCGGCCTGGATTTCAGCGGCTTCAGCGATCGTGCCGAGGCAGTGGCGGCGATGGAGGC
CGCCGGCCTGGCGGCCCCGGAGGCCGCCGACAGCGTGGGCCGGCTGCTGGTGGAGGCCTTCGAGCAGGCGGTGGAGACCA
CCCTGGTGCAGCCCACCTTCGTGATGGACTACCCGGTGGAGAATTCGCCCCTGGCCCGGGCCCACCGCAGCAAGCCCGGG
CTGGTGGAGCGCTTCGAGCTGTTCATCGTTGGGAGGGAGACGGCCAACGCCTTCAGCGAACTGATCGATCCCCTGGATCA
GCGCGCCAGGCTCGAGCTGCAGCAGCTGCGCCGCCAGGCGGGGGACCCCGAAGCCCAGACGGTGGACGAGGATTTTCTGC
ACGCCCTGGAGGTGGGCATGCCTCCCACCGGCGGCCTCGGCATCGGCATCGATCGCCTCGCCATGCTGCTCACCGACAGC
CCCTCGATCCGCGATGTGATCGCCTTCCCCCTGCTGCGCCCGGAGGCCCGCGAGAAGGCCGGAACCGACGCAGTGGGATA
A

Protein sequence :
MSDLRETRLEKARSLEALGRAPYALGFAPSHRTAELQQAHADLPNGEERAVAVAVAGRVMTRRVMGKLAFFTIADESGPI
QLFIEKAALLAAHPEEPEAFAQITSLVDGGDWIGVHGSLRRTDRGELSVKVSDWVMLSKALQPLPDKWHGLADVEKRYRQ
RYLDLIVSPHTRETFRRRARLVSAMRRWLDERDFLEIETPVLQTEAGGADARPFATHHNALDLPLTLRIATELHLKRLVV
GGFERVYELGRIFRNEGVSTRHNPEFTSVEIYQAFADYHTMMDLTEQLLAAACLEVCGDTRITYQGAEIDLTPPWRRVTM
HELVEQATGLDFSGFSDRAEAVAAMEAAGLAAPEAADSVGRLLVEAFEQAVETTLVQPTFVMDYPVENSPLARAHRSKPG
LVERFELFIVGRETANAFSELIDPLDQRARLELQQLRRQAGDPEAQTVDEDFLHALEVGMPPTGGLGIGIDRLAMLLTDS
PSIRDVIAFPLLRPEAREKAGTDAVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-80 46
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 9e-66 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_2218 YP_007046672.1 lysyl-tRNA synthetase VFG1668 Protein 7e-81 46