Gene Information

Name : Cyagr_0211 (Cyagr_0211)
Accession : YP_007044756.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 202665 - 205214 bp
Length : 2550 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif

DNA sequence :
ATGTTCGAGCGGTTTACCGAGAAGGCCATCAAGGTGATCATGCTGGCCCAGGAAGAGGCCCGCCGCCTCGGCCACAACTT
CGTCGGCACCGAGCAGATCCTGCTGGGCCTGATCGGCGAGGGCACCGGTGTCGCCGCCAAGGTCCTCAAGTCGATGGGGG
TCAACCTGAAGGACGCCCGGGTCGAGGTCGAAAAGATCATCGGCCGCGGTTCCGGCTTCGTTGCCGTCGAGATTCCCTTC
ACCCCGCGGGCCAAGAGGGTGCTGGAGCTCTCCCTGGAGGAGGCACGCCAGCTCGGGCACAACTACATCGGCACCGAGCA
CCTGCTCCTGGGGCTGATCCGTGAGGGCGAGGGCGTGGCCGCCCGGGTGCTCGAGAACCTCGGCGTCGACCTGGCCAAGG
TCCGCACCCAGGTGATCCGCATGCTGGGGGAGACGGCCGAAGTGACCTCCGGCAGCTCGGGCAAGGGCTCCACCAAGACC
CCCACCCTCGACGAGTTCGGCAGCAACCTCACCCAGCTGGCGGCTGAGTCCAAGCTCGACCCTGTCGTGGGCCGCCAGAA
CGAGATCGACCGGGTGATCCAGATCCTCGGCCGCCGCACCAAGAACAACCCCGTCCTGATCGGTGAGCCGGGCGTCGGCA
AGACCGCCATCGCCGAGGGCCTGGCCCAGCGGATCACCCAGGGGGAGATTCCCGACATCCTCGAGGACAAGCGCGTCCTC
ACCCTCGACATCGGCCTGCTGGTGGCCGGCACCAAGTACCGGGGTGAGTTCGAGGAACGGCTCAAGAAGATCATGGAGGA
GATCCGCTCCGCCGGGAACGTGATCCTTGTGATCGACGAAGTGCACACCCTGATCGGCGCCGGCGCGGCCGAAGGTGCCA
TCGATGCCGCCAACATCCTCAAGCCGGCCCTGGCCCGGGGCGAGCTGCAGTGCATCGGCGCCACCACCCTCGATGAATAC
CGCAAGCACATCGAGCGCGATGCGGCCCTGGAGCGCCGCTTCCAGCCGGTGATGGTGGGCGAGCCCTCCGTCGTCGACAC
GATCGAGATCCTCAAGGGGCTGCGGGAGCGCTACGAGCAGCACCACCGCCTCAAGATCAGCGATGAGGCCCTCGTCGCCG
CCGCCACCCTGGGCGACCGCTACATCAGCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATCGACGAGGCCGGCAGC
CGGGTGCGCCTGCTCAACTCCAAGCTGCCGCCCGCGGCCAAGGAGGTCGACAAGCAGCTGCGTGGCGTCCAGAAGGAGAA
GGAGGACGCCGTCCGCCAGCAGGACTTCACCAAGGCCGGTGAACTGCGCGACAAGGAGGTGGAGCTGCGCGACCAGATCC
GCACGATCCTCCAGGCCCGTCGCGACGACGAACCCGCCGGCAACTCCGGCGAGACCGACACCCCGGCCCTGCTGGGTGGC
CCCGTGGCCGACGACGCCAGCGAGGAAAGCCGCTCGCCCCTGGTCACCGAGGAGGACATCGCCCAGATCGTCGCCTCCTG
GACCGGCGTGCCCGTCCAGAAGCTGACCGAGAGCGAGTCGGTGAAGCTGCTGAACATGGAGGAGACCCTCCACCAGCGAC
TGATCGGCCAGGACGAGGCCGTCAAGGCCGTCTCCCGGGCCATCCGCCGGGCGCGGGTCGGCCTCAAGAACCCCAACCGT
CCCATCGCCAGCTTCATCTTCTCCGGACCCACCGGCGTCGGCAAGACGGAACTCACCAAGGCTCTCGCCGCCTACTTCTT
CGGCAGCGAGGACGCCATGATCCGCCTCGACATGAGCGAGTTCATGGAGCGCCACACCGTCAGCAAGCTGATCGGTTCGC
CTCCGGGCTACGTGGGCTTCAACGAGGGCGGCCAGCTCACCGAGGCCGTGCGCCGTCGTCCCTACACCGTGGTGCTGTTT
GACGAGATCGAGAAGGCCCACCCCGATGTCTTCAACCTGCTGCTGCAGCTGCTGGAGGACGGCCGGCTCACCGATTCCAA
GGGACGCACGGTCGACTTCAAGAACACCCTGATCATCATGACCTCAAACATCGGTTCGAAGGTGATCGAGAAGGGCGGCG
GCGGCCTCGGCTTCGAGTTCGGCGGCGGCGACGTGGAGGAAACCCAGTACAACCGCATCCGCTCCCTGGTCAACGAGGAG
CTCAAGCAGTACTTCCGCCCCGAATTCCTCAACCGTCTCGACGAGATCATCGTCTTCCGTCAGCTCACCCGCGACGAGGT
GAAGCTGATTGCCGAGATCATGCTGCGGGAGGTCTTCGCCCGTATGCAGGACAAGGGCATCGGCATGTCCGTCACCGAGG
CCTTCAAGGAGCGCCTCGTGGAGGAGGGCTACAACCCCAGCTATGGCGCCCGTCCCCTGCGCCGTGCCGTGATGCGCCTG
CTCGAGGATTCCCTGGCGGAGGAATTCCTCTCCGGCCGGATCGGCGAGGGCGATGCCTGCCTGGTGGATGTCGACGACGA
CAAGCAGGTGGTGATCCGCAAGCAGACCATCACCCCGCCGCTGCCGGAGCTGGCCAGCGCCAGCGCCTGA

Protein sequence :
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFVAVEIPF
TPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVTSGSSGKGSTKT
PTLDEFGSNLTQLAAESKLDPVVGRQNEIDRVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRITQGEIPDILEDKRVL
TLDIGLLVAGTKYRGEFEERLKKIMEEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
RKHIERDAALERRFQPVMVGEPSVVDTIEILKGLRERYEQHHRLKISDEALVAAATLGDRYISDRFLPDKAIDLIDEAGS
RVRLLNSKLPPAAKEVDKQLRGVQKEKEDAVRQQDFTKAGELRDKEVELRDQIRTILQARRDDEPAGNSGETDTPALLGG
PVADDASEESRSPLVTEEDIAQIVASWTGVPVQKLTESESVKLLNMEETLHQRLIGQDEAVKAVSRAIRRARVGLKNPNR
PIASFIFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGFNEGGQLTEAVRRRPYTVVLF
DEIEKAHPDVFNLLLQLLEDGRLTDSKGRTVDFKNTLIIMTSNIGSKVIEKGGGGLGFEFGGGDVEETQYNRIRSLVNEE
LKQYFRPEFLNRLDEIIVFRQLTRDEVKLIAEIMLREVFARMQDKGIGMSVTEAFKERLVEEGYNPSYGARPLRRAVMRL
LEDSLAEEFLSGRIGEGDACLVDVDDDKQVVIRKQTITPPLPELASASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_0211 YP_007044756.1 chaperone ATPase VFG0079 Protein 0.0 58
Cyagr_0211 YP_007044756.1 chaperone ATPase VFG0080 Protein 9e-148 50