Gene Information

Name : Cyagr_2049 (Cyagr_2049)
Accession : YP_007046511.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1978541 - 1979437 bp
Length : 897 bp
Strand : -
Note : PFAM: Integrase core domain; manually curated; non-canonical start codon

DNA sequence :
CTGATCGACCAGCTCGCTGATCAGCATTCCATCTCCTGGCTGTGCCGGCAACTGGGCGTGGCCCGCAGTGGGTTCTACGC
CTGGCGGCAGCGGCACGAGGCGCCGGGAAAGCGAGCGGCTGAGAACGCCCGACTCACCGCTGAGATCCAGGCGGTGTTCG
GCGAGCACCGGGGCTTCTACGGCTCGCCTCGGATCCACCAGGAACTGCGCGCAGCCGGCCACCCGGTGGGACGCCACCGT
GTCGCTCGGCTCATGCGTCGTGCCGATCTGCGGGCCAGGACCCGAAAGGCGTTCCGGCCCTGCAGCAGGGCCAGCAGCGG
AGCCGCTGGGGTGGCGGAGAACCTGCTGCAGCAGGACTTCCAGCCCCCGGCCCCGAACCGCTGCTGGGCCGGCGACATCA
CCTACATCCGCACCAGCGCCGGCTGGCGATACCTGGCGGTGTGGATCGATCTGTTCAGTCGCCGTGTGGTGGGTTGGACG
CTGAATCAACGCATGGATGCCGCCCTGGTGATCGAGGCCCTCAACCGGGCCCTCGGCCACCGGCAGGTGGAGCCGGAGCA
GCTGCTGATCCACACGGATCAGGGCAGCCAGTACCGGGCCAGCGACTACCGCGACCGGCTGGCCAAACACGGGATCCTCT
GCAGCATGTCCGCCAAGGGATGCTGCTGGGACAACGCGGTGGTGGAGAGCTTCTTCTCCACCCTCAAATTGGAACTGGAC
CTCGATGACGATCGGGCAGTCCTAATTTCACCGCAGCAGCTGCAGCGCGATCTGGCCTTCTGGATCGAGGGCTACTACAA
CCGCGAGCGCCGCCATTCAACGGTCGGTTACCTGAGCCCGATCGACTACGAGCAGCGGTTCATCGCTGCATCTACACTCA
CCTTTGTGACCCCCTGA

Protein sequence :
MIDQLADQHSISWLCRQLGVARSGFYAWRQRHEAPGKRAAENARLTAEIQAVFGEHRGFYGSPRIHQELRAAGHPVGRHR
VARLMRRADLRARTRKAFRPCSRASSGAAGVAENLLQQDFQPPAPNRCWAGDITYIRTSAGWRYLAVWIDLFSRRVVGWT
LNQRMDAALVIEALNRALGHRQVEPEQLLIHTDQGSQYRASDYRDRLAKHGILCSMSAKGCCWDNAVVESFFSTLKLELD
LDDDRAVLISPQQLQRDLAFWIEGYYNRERRHSTVGYLSPIDYEQRFIAASTLTFVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-38 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 8e-39 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-38 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-34 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-34 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-34 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-34 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_2049 YP_007046511.1 transposase VFG1631 Protein 1e-34 44