Gene Information

Name : Cyagr_0125 (Cyagr_0125)
Accession : YP_007044680.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 116492 - 118210 bp
Length : 1719 bp
Strand : -
Note : PFAM: Integrase core domain

DNA sequence :
ATGCCCGCCCCTCTGTCGTTGCGGATCAAGGAGCGGTACATGGCCAAACGGGCCAGCGGCCTCAACCAGCAGGTGGCGGC
CGATGCGGTGGGGATCTCGCTGCGCAGCGCCCAGCGGATCGACCGGGGTGAGCTGCAGCCGCAGGGGCAACAGCAGCGGC
GGGGCCGCCATTGGCGAACCCGGGTTGATCCGCTGGCCGACGTCTGGGACAGCGTGCTGGTGCCCATGCTGGAGAGGGCG
CCGCAGCTCGAACCCCAGACCCTGCTGCTCCATCTGGAGCAAGCCTTCCCAGGCCAGGAGTGGTTTCGCCGTCAACGCAC
GCTCCAGCGGCGTGTGGAGCAGTGGCGGGCGCTATACGGACCGGGCCAGGAGGTGATGTTCCTGCAAGAGCACCGGGCCG
GTGTGCTGGGGATCTCCGATTTCACGCTGCTCAAGGGTGAGCCGATCACCGTGGCCGGTGTGGTGCTGGAGCACCGGCTG
TTCCACTTCCGCCTGCCGTTCTCGGGCTGGTGCCATGTGGAGGTGATCCACGGCGGCGAAAGCTTTGTCGCCCTGGCCGA
GGCCCTGCAGAACGCTCTCGCCCTCTGCGGCGGGGTGCCGGCGGAGCACCGCACCGACAGCCTCAGCGCCTGCTTCCGCA
ACCGTGACGGCAGCTACGCCGGGGATTACACCAGCCGCTACCGCGAGCTCTGCACCCACCTGGGCGTGATGGCCACCCGC
AACAACCGCGGCGTGGCCCACGAGAACGGTGCCATCGAGGGCCCGCACCGGCACTGGAAACACCGGCTGGAGCAACAGCT
GATCCAGCGCGGCAGCCGTGATTTCGCCACCGAGGCCGACTACCGCCAGCTGGTGGCGCAGGTCAGCGCCAGCCTCAACA
ACCGCACGGAGGTGGAGGGGAAGCTGGCGATCGAGCGGCTGCACCTGCAGCCGCTGCCGGTGGAGCGCTTTGCCGACTAC
GAGCCTGTGGTGGCGCGGGTGCGGAGCACCAGCACGATCGAGGTGCGCTCCGTCACCTACAGCGTCCCCTCACGGTTGAT
CGGCCAGCAGCTCACGGTTCACCTGCGCCATGACCGGCTGGATCTGTTCCTGCGCAGCCAGTTCGTCGAAACCCTGCCGC
GGTTGTATGCCCAGAAGGGACAGAAGGCCTTGCGGCGGATCGATTTCCGCCATGTGATCGAGAGCCTGCGCCGCAAGCCC
CGCGCCTTGCTGCGCGCCCAGCTGCAGGACGACCTGCTGCCCGGCGAGAGCTGGCGACAGCTGTGGCGCCGACTGCTGAC
AGCCCTGCCGCCGGATGACGCGGCCAAGGTCATGGTCGACGCCCTGCATGTCGCCGCCCGCACAGGCGATCTGGCCGGCG
TGGAGCGGTATCTGCGGCGAGCGCTGCGCAGCGGTGCTCTCAGCCTCACGGCTCTGCGTGATCACTACGGCCTGCGGCCC
CCCAGGGGCCTTGCGGCCCTGCCCCAACTTCAGATCCCTGAACACACCTTGAGCAGCTATGACGAACTCCTGGGCGGAGC
CCCCCCGACGGCCGACGCTGGAAACAGCTCTGCCGACCCTTCTCAAGCAGTTGAAACTGGCGCAGTTCCGCAGCCAGTGG
CAGGCAGCGGAGCAGCAGGCCAATGCCGATGGCTGGAGCCCGGCCAGCTACCTCTACGTGCTGGCCGAGCAGGAGCACCA
GCAACGCCACCAGGCCCGGTTGCGGCGGTTATTGCATGA

Protein sequence :
MPAPLSLRIKERYMAKRASGLNQQVAADAVGISLRSAQRIDRGELQPQGQQQRRGRHWRTRVDPLADVWDSVLVPMLERA
PQLEPQTLLLHLEQAFPGQEWFRRQRTLQRRVEQWRALYGPGQEVMFLQEHRAGVLGISDFTLLKGEPITVAGVVLEHRL
FHFRLPFSGWCHVEVIHGGESFVALAEALQNALALCGGVPAEHRTDSLSACFRNRDGSYAGDYTSRYRELCTHLGVMATR
NNRGVAHENGAIEGPHRHWKHRLEQQLIQRGSRDFATEADYRQLVAQVSASLNNRTEVEGKLAIERLHLQPLPVERFADY
EPVVARVRSTSTIEVRSVTYSVPSRLIGQQLTVHLRHDRLDLFLRSQFVETLPRLYAQKGQKALRRIDFRHVIESLRRKP
RALLRAQLQDDLLPGESWRQLWRRLLTALPPDDAAKVMVDALHVAARTGDLAGVERYLRRALRSGALSLTALRDHYGLRP
PRGLAALPQLQIPEHTLSSYDELLGGAPPTADAGNSSADPSQAVETGAVPQPVAGSGAAGQCRWLEPGQLPLRAGRAGAP
ATPPGPVAAVIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-76 45
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-76 45
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 5e-75 44
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 1e-75 44
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 1e-75 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_0125 YP_007044680.1 integrase family protein VFG1728 Protein 8e-77 45