Gene Information

Name : Cyagr_1250 (Cyagr_1250)
Accession : YP_007045769.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1251755 - 1252888 bp
Length : 1134 bp
Strand : +
Note : PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD

DNA sequence :
ATGGCGCCGCCTGCCGGACGCGCCCGCCCCATGAGCCCCGGATCCCCCTGGCATCGCTGGATGGACAGGGCCCTGCAGCT
GGCCGCCCTCGCCGAAGGCCGCACCAGCCCCAATCCCCTGGTGGGCGCCGTGGTGCTGGATGCCGACGGGACGCTGGTGG
GGGAGGGATTCCATGCGCGGGCTGGGGAGGCCCATGCGGAGGTGGGCGCCCTGGCCCAGGCGGGCGAGCGGGCCCGGGGC
GGCACCCTGGTCGTGACCCTGGAACCCTGCTGCCACCACGGCCGCACACCCCCCTGTTGCGAGGCGGTGATCGCCGCCGG
CATTGCCCGGGTGGTGCTGGCCATGGCCGACCCCAACCCCCTGGTGGCCGGCGGCGGCAGCGCCCGCCTGCGGGCGGCGG
GCCTGGAGGTGATCGCAGGGGTGAGGGAGGCCGAGGCGCGCCGGCTCAACCGGCCCTTTCTGCACAGGATCGCCACCGGC
CGACCCCTGGGGATCCTCAAATGGGCCATGAGCCTGGATGGGCGCACGGCGCTGCCCAACGGTGTCAGCCAGTGGATCAG
TGGCCCGGAGGCCCGTGCCTGGGTGCACCGCCTCCGTGCCCGCTGCGATGCCGTGATCGTGGGCGGCGGCACGGTTCGGG
CCGACGACCCCCTGCTCACCAGCCGGGGGCAGCGCAGCCCCGAACCCCTGCGGGTGGTGCTGAGCCGGAGCCTCGACCTG
CCGGAGAAGGCCCGCCTGTGGGACACCTCCGGGGCGCCGACCCTGGTGGCCCATGGACCGGGAGCGCCGCAGGAGGCACG
TCGGAGGCTGGCCGGATCCGGGGCGGAAAGCCTGGAACTGCGGGCCTGTGAACCGGCCAGGCTGCTAGAGGCGCTGGAGG
CTCGCGGTTGCAATCGGGTGCTCTGGGAGTGCGGTCCGGAACTGGCGGCGGCCGCGCTGCGCCAAGGCTGCATCCAGCAG
GTGGCAGCCGTGATCGCGCCCCGGCTACTGGGTGGCCACCCAGCCCGGACTCCCCTGGGCGACCTCGGGCACACCAGCCT
CGATGCCACATCACTGTGGCCTCTGGCTAAGGTCGGCCGGATCGGCGACGACCTGCTCTGCTGGGCCATCCCAGGAACCC
GGACGGCGCTCTGA

Protein sequence :
MAPPAGRARPMSPGSPWHRWMDRALQLAALAEGRTSPNPLVGAVVLDADGTLVGEGFHARAGEAHAEVGALAQAGERARG
GTLVVTLEPCCHHGRTPPCCEAVIAAGIARVVLAMADPNPLVAGGGSARLRAAGLEVIAGVREAEARRLNRPFLHRIATG
RPLGILKWAMSLDGRTALPNGVSQWISGPEARAWVHRLRARCDAVIVGGGTVRADDPLLTSRGQRSPEPLRVVLSRSLDL
PEKARLWDTSGAPTLVAHGPGAPQEARRRLAGSGAESLELRACEPARLLEALEARGCNRVLWECGPELAAAALRQGCIQQ
VAAVIAPRLLGGHPARTPLGDLGHTSLDATSLWPLAKVGRIGDDLLCWAIPGTRTAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-37 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-37 42