Gene Information

Name : Cyagr_1052 (Cyagr_1052)
Accession : YP_007045574.1
Strain : Cyanobium gracile PCC 6307
Genome accession: NC_019675
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1038245 - 1038985 bp
Length : 741 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
TTGAGACAGTTCTGGGATCTCCCCGCCGCCGACACTGATAATGCCGGCATGCATCCCCCCCTCCTGGTCGTCGAGGACGA
CGACACGATCCGCGAGACCATCCGCGACGTGCTGGTGCTGGAGGGTTTTTCCGTCACCGCCTGCGGCAACGGCACAGAGG
CCCTGCGCACCCTGCAGGAATGCCCTCCGGGAGAGGAATTCTCCCTGGTGGTGCTCGATCTGATGCTGCCCGGCCTGGGG
GGCCTCGATCTCTGCCGGCAACTGCGTTCCGCCGGCAACCAGACCCCCATCCTGGTGGTCAGTGCCCGCGACAGCGAAAC
CGACCGGGTGCTGGGCCTGGAGGTGGGGGCCGACGACTATCTGATCAAGCCCTTCGGCCTGCGGGAACTGGTGGCCCGCT
GCCGGGCCCTGATGCGCCGCAGTCGCTCCGTGGAGGTGGCCGCCAAGGTGCTCCAGCACGCCAATCTCAGCCTGTACCCC
GAGGAGTGCCGCGTCACCCGCGATGGCCTGGAGGTCAACCTTTCGCCGAAGGAGTACCGGCTGCTGGAGCTGTTCATGCA
GAACCCCCGCCGCGTCTGGAGCCGCGACAAGCTGCTGGAGCGGGTCTGGGGCTACGACTACTTCGGCGACAGCAAGACCG
TCGACGTCCACATCCGCTGGCTGCGGGAGAAGCTGGAGGCCAACCCCTCGGCTCCGGAGCACCTGATCACCGTCCGGGGC
TTCGGCTACCGCTTCGGCTGA

Protein sequence : 
MRQFWDLPAADTDNAGMHPPLLVVEDDDTIRETIRDVLVLEGFSVTACGNGTEALRTLQECPPGEEFSLVVLDLMLPGLG
GLDLCRQLRSAGNQTPILVVSARDSETDRVLGLEVGADDYLIKPFGLRELVARCRALMRRSRSVEVAAKVLQHANLSLYP
EECRVTRDGLEVNLSPKEYRLLELFMQNPRRVWSRDKLLERVWGYDYFGDSKTVDVHIRWLREKLEANPSAPEHLITVRG
FGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-26 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 2e-37 43
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-30 43
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 3e-34 43
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF310956.2.orf0.gene Protein 5e-27 42
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain U35369.1.gene1.p01 Protein 5e-27 42
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene2255. Protein 5e-27 42
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 4e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 3e-36 44
Cyagr_1052 YP_007045574.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 7e-29 43