Gene Information

Name : BN341_p1050 (BN341_p1050)
Accession : YP_007043513.1
Strain : Helicobacter heilmannii ASB1.4
Genome accession: NC_019674
Putative virulence/resistance : Virulence
Product : Type I restriction-modification system,restriction subunit R
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.21.3
Position : 797563 - 799782 bp
Length : 2220 bp
Strand : -
Note : -

DNA sequence :
TTGAAACAACACCAAGAAAAAGACCTTGAAGCCCTTATAGAGGGGCATTTACTGCAGAGTGGCTACACCAGGGGTGTTTG
CTACCACAAAGAACTTGGTTTAGACACCGCCTTGTTGTGGGGATTTTTAGAGAAAACACAGGCTAAAGCTTTAGAGGACT
TGGGCCAAAGAGACCCAGATTTTAAACAACACCTCTTAGAGCACTTAAAACAAAAAATTAAAGAAAAAGGCATGCTCAAA
ATGCTTAAAGAGGGGATAGAGCATTTAGGGCTAAGCTTTAAGCTCGCCTACAACAAACCCCAAACCCAAAAGAATTTAGA
CGCTTGGCAAAACTACCAAAGCAATGTTTTTTCTCTCATGCGCCAATTGCACTACAGCACCAAAAACAACAATTCTGTAG
ATTTGGCAATCTTTTTAAACGGCCTGCCCCTTTTTACTTTAGAGCTTAAGCACAGCTTAAACGCCCAAAATGCCAAGCAC
GCCCTTAAACAATACGGCAAAAGAGACCCCCACGAACCCCTATTTAAACACGCCCTAGCCCACTTCGCCCTAGATGAAAG
CTTTGTTTATCTTGCCACAAAACTAGAGGGGACACGCACCCACTTTATCCCCTTTAACAAGGGGCTAAACGATGGGAGCG
CTGCTTTAGATCTAGAGTGTGGGGCGGGCAATCCTTTAAACCCGCAGGGGTTCAAAAGCGCGTATTTATGGGAGCAAGTC
CTGCAAAAAGATCAAGTTTTAAATCTCATTTTTAACTTCTTGCAACCTGTGGACAGGGGGGTGATTTTCCCTCGTTACCA
CCAACTTAGTGCCGTGCAAAGGCTGTGTGCGGCCGTGCTAAAAGATCGTGTGGGGGGGCGTTATTTGATTGAGCATGGCG
CGGGCAGCGGCAAGAGCAACACCATTGCGTGGCTCACCTACGCTTTAGTGGGGCTTAGCGTGGATGAAAAGCCCTTGTTT
GATAGTGTCTTGGTCATCACCGATCGCATCATTTTAGACAAACAATTACAAGAGAACATCCAAAGCTTTTTTTCTATTAA
GGGGGTTGTGGAGGCCATCACTGAGGGCAGTTGCCAACTTAAGGAGGCGTTGGCCCAGGGCAAAAAGGTCATCATCGCCA
CGATCCAAAAGTTCCCCTATATCTTAGAAGAATTGCCCAGCCTCACAGATAAAAAGTTTGCCATCATCATAGACGAGGCG
CACTCCTCTCAGGGCGGGGCGTATGGCGATGCTCTCAAAAAAGCCACAGGCGCGCCCACACAAGAAGAGCTAGACCCCGA
TGCGTTTTTACTGCAAACCATTAAAGCCAAGCAATTTAACAAAAACGCCTCTTATTTTGCCTTTTCTGCCACGCCTAAGC
CTGAAACTTTGGAACTTTTTGGGACAAAGACCAAGGCAGAGCAGTTCATTCCCTTCCACTTGTATTCCATGAAACAAGCC
ATCGAAGAGGGTTTTATCTTGGATGTTTTAAAATTTTACACCACCTACACATTCTACGCCAATTTAGTGGCTAAAGCCCC
AGATGATCCACTCTATGAAAGGGACCCCGCCTTTAGAAAGCTTAAAACCTATGTCAAAGAGCACCCTAAAAGCATTGAAG
AAAAAACAAAAGCGATGCTCGCCCATTTTTACACCAACACGCATCATAAAATCGGGGGCAGGGCTAAGGCGATGGTCATT
ACCAGCTCGCGTCAAGTGGCCATGCGCTATTTTAAAGCCTTTCAAGCACAACTAGCAGAGGAAAAACGCCCCCATAAGGC
CTTGGTTGCCTTTTCTGGAGAAGTGCAAGGACAAAGCGAGGCAAGTTTAAATGGCTTTAGCGAGAGCCAAACCCCTAAGG
CCTTTGACACCGATGCATACCGCTTTTTGATCGTGGCAGACAAATACCAAACCGGCTTTGATCAGCCCTTACTGCACACG
ATGTATGTGGATAAGGCTTTAAGTGGGGTGGCATGTGTGCAGACGCTATCACGCTTGAATCGCATACACCCAAATAAAAA
GGACACCTGCATTTTAGACTTTGAAAACGACACTGAAAAAATCAGCAAAGCCTTTGAGCCCTATTACAAACAAACCTTTT
TAGCCAAGCCAAGCGACCCCAATAAACTTTATGACTTAAAAAGCCATTTAGAGGGCTATGGGGTGTATACACAAGAGCAA
ATTGAGGCCTTTTATCTAGCCCTCTTAAAGCCCCCTTGCCTAAAATCCATGCCATGCTAG

Protein sequence :
MKQHQEKDLEALIEGHLLQSGYTRGVCYHKELGLDTALLWGFLEKTQAKALEDLGQRDPDFKQHLLEHLKQKIKEKGMLK
MLKEGIEHLGLSFKLAYNKPQTQKNLDAWQNYQSNVFSLMRQLHYSTKNNNSVDLAIFLNGLPLFTLELKHSLNAQNAKH
ALKQYGKRDPHEPLFKHALAHFALDESFVYLATKLEGTRTHFIPFNKGLNDGSAALDLECGAGNPLNPQGFKSAYLWEQV
LQKDQVLNLIFNFLQPVDRGVIFPRYHQLSAVQRLCAAVLKDRVGGRYLIEHGAGSGKSNTIAWLTYALVGLSVDEKPLF
DSVLVITDRIILDKQLQENIQSFFSIKGVVEAITEGSCQLKEALAQGKKVIIATIQKFPYILEELPSLTDKKFAIIIDEA
HSSQGGAYGDALKKATGAPTQEELDPDAFLLQTIKAKQFNKNASYFAFSATPKPETLELFGTKTKAEQFIPFHLYSMKQA
IEEGFILDVLKFYTTYTFYANLVAKAPDDPLYERDPAFRKLKTYVKEHPKSIEEKTKAMLAHFYTNTHHKIGGRAKAMVI
TSSRQVAMRYFKAFQAQLAEEKRPHKALVAFSGEVQGQSEASLNGFSESQTPKAFDTDAYRFLIVADKYQTGFDQPLLHT
MYVDKALSGVACVQTLSRLNRIHPNKKDTCILDFENDTEKISKAFEPYYKQTFLAKPSDPNKLYDLKSHLEGYGVYTQEQ
IEAFYLALLKPPCLKSMPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 1e-132 44
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 1e-132 44
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 8e-133 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN341_p1050 YP_007043513.1 Type I restriction-modification system,restriction subunit R VFG1098 Protein 4e-133 44