Gene Information

Name : BN341_p1310 (BN341_p1310)
Accession : YP_007043253.1
Strain : Helicobacter heilmannii ASB1.4
Genome accession: NC_019674
Putative virulence/resistance : Virulence
Product : Flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 565648 - 566400 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence :
TTGCGTTTTTTCTTCTCTTGGGCTGTGCTTGCCTCTTGTGTGTTGTTTGCGGCCACGCTTAAAGACCCCGTGATCCCCAC
GATTAATTTATCCCTAAGTGCCCCCCACACGCCCACACAGTTGGTAACGACTCTAAATGTGGTGTTGGTGCTGACCCTCT
TAGTGCTCGCCCCATCGCTCATTTTGGTGATGACCAGCTTTATCCGCCTAATTGTGGTGTTCTCATTTTTACGCACCGCT
TTAGGCACACAACAAACCCCCCCCACGCAGATTTTGGTGTCTTTGGCATTGATTTTGACCTTTTTTATCATGGAGCCCGC
CGCTAAAAAGAGTTATGACACCGCCATCAAGCCCTATTTAGCCGAAAAGATTTCTTACACTGAGGCCTTTGAAGTGGGCA
TTGTGCCTTTTAAAGAATTCATGTTGCAAAACACCCGTGAAAAGGACCTAGCCCTATTTTTTAGAATCCGCCATTTAGAA
AACCCCAAAACCCCCAGTGCCGTGCCCTTAACAGTGCTGGTGCCGGCGTTTATGATCAGCGAGCTTAAAACCGGGTTTCA
AATCGGCTTCTTGCTCTACTTGCCCTTTTTAGTCATTGACATGGTCGTGAGTTCCATTTTGATGGCGATGGGGATGATGA
TGTTGCCCCCCGTGATGATCTCCCTGCCCTTTAAAATCTTGGTGTTTATCTTGGTGGATGGGTTTAATCTCTTGGTAGAA
AATTTAGTAGCGAGTTTCAAACACCTCTCTTAG

Protein sequence :
MRFFFSWAVLASCVLFAATLKDPVIPTINLSLSAPHTPTQLVTTLNVVLVLTLLVLAPSLILVMTSFIRLIVVFSFLRTA
LGTQQTPPTQILVSLALILTFFIMEPAAKKSYDTAIKPYLAEKISYTEAFEVGIVPFKEFMLQNTREKDLALFFRIRHLE
NPKTPSAVPLTVLVPAFMISELKTGFQIGFLLYLPFLVIDMVVSSILMAMGMMMLPPVMISLPFKILVFILVDGFNLLVE
NLVASFKHLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-21 45
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-21 45
escR AAC38369.1 EscR Virulence LEE Protein 3e-20 44
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 1e-20 44
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 9e-21 44
escR AAK26700.1 EscR Virulence LEE Protein 1e-20 44
escR AAL57527.1 EscR Virulence LEE Protein 1e-20 44
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 1e-20 44
escR CAC81847.1 EscR protein Virulence LEE II Protein 1e-20 44
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 1e-20 44
escR CAI43889.1 EscR protein Virulence LEE Protein 1e-20 44
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 1e-20 44
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 1e-20 44
escR AAC31528.1 L0049 Virulence LEE Protein 9e-21 44
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 2e-24 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 2e-24 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 2e-24 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-24 43
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 1e-23 42
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 1e-23 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 6e-25 42
unnamed AAL06354.1 EscR Virulence LEE Protein 6e-21 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-17 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-17 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-17 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 1e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG1259 Protein 1e-40 58
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG2338 Protein 8e-39 55
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG2494 Protein 9e-42 55
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG2016 Protein 1e-39 54
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG0715 Protein 2e-20 44
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG0827 Protein 5e-21 44
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG0519 Protein 9e-25 43
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG0394 Protein 7e-25 43
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG0044 Protein 2e-25 42
BN341_p1310 YP_007043253.1 Flagellar biosynthesis protein FliP VFG0188 Protein 2e-26 41