Gene Information

Name : BN341_p0403 (BN341_p0403)
Accession : YP_007044160.1
Strain : Helicobacter heilmannii ASB1.4
Genome accession: NC_019674
Putative virulence/resistance : Unknown
Product : Hydroxymethylpyrimidine phosphate synthase ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1445214 - 1446548 bp
Length : 1335 bp
Strand : -
Note : -

DNA sequence :
ATGCCACGAGATTACCTAGACAAGCGCACCCAGCGCATTAAAACCCAACTACACTACGCTAAAAAGGGGATCATCACCGA
AGAAATGCACTATGTTGCCAATGTGGAGGAATTAAGTCCCGAATTGGTGCGTAAAGAAGTCGCCAAAGGGCGCTTGATTA
TCCCTGCCAATATCCGGCATAGGAATTTAGAGCCTATGGGAATAGGCATTGCGCTTAAGACCAAAATCAACGCCAATATC
GGCAGTTCGGCGATCATCCACTCCGCCCAAGGGGAAGTGGAAAAGTTGCAGATTGCCATTAAATATGGGGCGGATACAGT
GATGGATTTATCCACGGGCGGGGATTTGGATGCGATCCGTCAAGAAATCATTGCTACCTCCAGCGTGCCCATTGGCACCG
TGCCCATGTACCAAATCCTGCACGATGTGAACAACGATGTGATGAAACTAGACATAGACACGATGCTAGCCGTGCTCGAA
AAACAAGCCAAACAAGGCGTGAGTTACTTCACCATCCACTGCGGGTTTTTGCTCGAGCATATGCCCTTTGTGAGCCGCCG
TAAAATGGGGATTGTGAGCCGTGGGGGGAGTTTGATGGCCTCTTGGATGATGCACTATCACAAACAAAACCCCTTTTACG
AAGCTTTTGATGACATTTTGGCGATTTGCCAAGAGTATGATGTGTCTTTGAGTTTGGGCGATTCGTTGCGTCCCGGGTGT
TTGGCTGATGCCAGCGACACCGCGCAATTTGCCGAATTAAAGGTGCTTGGTGAGCTGGCTAAGAGAGCCTATGAAAAAGA
TGTGCAGGTGATGATTGAAGGCCCCGGGCATGTGCCCTTGAATCAAATCGAGCGCAATGTCAAATTGCAAAAAGAATTGT
GTAACGATGCCCCCTTTTATGTGCTAGGGCCCTTGGTGACAGACATCGCGGCTGGCTACGACCACATCGCCAGTGCGATC
GGAGCGTGCTTGGCGGCTTATAAGGGCGTGGCGATGCTCTGTTATGTTACGCCTAAAGAGCATTTGGGCTTGCCTAATGC
TAAAGATGTAAGAGAGGGGATACTCGCCTATAAAATCGCCGCGCATGCGGCTGACATTGCTAGGGGGCGTGTCAATGCAC
GGGTGCGCGATGACTTGATGAGCGATGCACGGTATGCCTTTGAGTGGAACAAACAATTTGAACTCGCCCTTGATCCCGAC
AGGGCGCGAGAATACCACGATGAAGCCCTGCCCCAAGAGGTCTTTAAAGAGGCAGAGTTTTGCTCCATGTGCGGGCCTAA
GTTCTGTAGCTATAAGGTGAGCCAAGACATTTTTAAAAACTATAAAGGGGCTTAG

Protein sequence :
MPRDYLDKRTQRIKTQLHYAKKGIITEEMHYVANVEELSPELVRKEVAKGRLIIPANIRHRNLEPMGIGIALKTKINANI
GSSAIIHSAQGEVEKLQIAIKYGADTVMDLSTGGDLDAIRQEIIATSSVPIGTVPMYQILHDVNNDVMKLDIDTMLAVLE
KQAKQGVSYFTIHCGFLLEHMPFVSRRKMGIVSRGGSLMASWMMHYHKQNPFYEAFDDILAICQEYDVSLSLGDSLRPGC
LADASDTAQFAELKVLGELAKRAYEKDVQVMIEGPGHVPLNQIERNVKLQKELCNDAPFYVLGPLVTDIAAGYDHIASAI
GACLAAYKGVAMLCYVTPKEHLGLPNAKDVREGILAYKIAAHAADIARGRVNARVRDDLMSDARYAFEWNKQFELALDPD
RAREYHDEALPQEVFKEAEFCSMCGPKFCSYKVSQDIFKNYKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 9e-113 56
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 9e-113 56
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 1e-106 52