Gene Information

Name : BN6_45450 (BN6_45450)
Accession : YP_007038698.1
Strain : Saccharothrix espanaensis DSM 44229
Genome accession: NC_019673
Putative virulence/resistance : Resistance
Product : Two-component system, response regulator of the winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4960968 - 4961651 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGGACTACTCGGTACTGCTGGTCGAGGACGACGAGCACATCAGGCAGGCGCTCGGGCTCGCGCTGGGCGACGAGGGGTT
CGCCGTGTCGGACGCGGTCTCCGGCGAGGACGCGCTGCGCGTGCTCGACCACGGGTCCTACGACGTGGTGCTGCTGGACC
TCATGCTCCCCGGCGTGGACGGGCTGGAGGTGTGCCGGACGTTGCGGGCGCGCGGCGACCTGCCGATCATCATCGTGACC
GCCCGCGCCGACACCGCCGACGTGATCGCCGGGCTGGAGGCGGGCGCGGACGACTACGTCACCAAACCGCTGGCGGCCGA
CGTGCTGGCGGCGCGCATCCGGGCGCTGCTGCGGCGGCGCGGGGGCGGGCGGCAGGACGAGGTGCTGCGGTTCGGCGGGC
TGGAGGTCCGCCCGGACGTGGGGACCGTGCACCGCGCCGGCGTCGAGGTGCACCTGACCCGGACCGAGTTCCGGCTGCTG
GTGGAGCTGGGGTCGGCGGCGGGCCGGATCGTCACGCGGGAACAGCTGCTGCAACGGGTGTGGGGCTACGACTACTTCGG
CGACACCCGCCTGCTGGACGTGCACATCCGCCGGTTGCGCCGCAAGGTCGAACCCGACCCGGACGACCCGACCCTGGTGC
TCACGGTCCGGGGCTCGGGGTACCGGATCGACCCGGACCGGTGA

Protein sequence : 
MDYSVLLVEDDEHIRQALGLALGDEGFAVSDAVSGEDALRVLDHGSYDVVLLDLMLPGVDGLEVCRTLRARGDLPIIIVT
ARADTADVIAGLEAGADDYVTKPLAADVLAARIRALLRRRGGGRQDEVLRFGGLEVRPDVGTVHRAGVEVHLTRTEFRLL
VELGSAAGRIVTREQLLQRVWGYDYFGDTRLLDVHIRRLRRKVEPDPDDPTLVLTVRGSGYRIDPDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-31 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-30 42
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN6_45450 YP_007038698.1 Two-component system, response regulator of the winged helix family AE000516.2.gene3505. Protein 8e-42 44
BN6_45450 YP_007038698.1 Two-component system, response regulator of the winged helix family AF310956.2.orf0.gene Protein 1e-30 41
BN6_45450 YP_007038698.1 Two-component system, response regulator of the winged helix family NC_012469.1.7686381. Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN6_45450 YP_007038698.1 Two-component system, response regulator of the winged helix family VFG1563 Protein 8e-32 42
BN6_45450 YP_007038698.1 Two-component system, response regulator of the winged helix family VFG1702 Protein 6e-31 42
BN6_45450 YP_007038698.1 Two-component system, response regulator of the winged helix family VFG1389 Protein 8e-26 41