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Name : clpC (BN6_03710) Accession : YP_007034575.1 Strain : Saccharothrix espanaensis DSM 44229 Genome accession: NC_019673 Putative virulence/resistance : Virulence Product : putative ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 372209 - 374779 bp Length : 2571 bp Strand : + Note : - DNA sequence : ATGTTCGAAAGGTTCACCGACCGCGCGAGGCGGGTGGTTGTCCTGGCCCAAGAAGAGGCCCGGATGCTCAACCACAACTA CATCGGCACCGAACACATCCTCTTGGGGTTGATCCACGAGGGTGAAGGTGTCGCCGCCAAGGCGCTGGAGTCGTTGGGGA TCGCGCTGGAGGGCGTCCGCCAGCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGCCACATCCCCTTC ACCCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGTTGCGGGAGGCGCTTCAGCTCGGCCACAACTACATCGGCACGGAGCA CATCCTGCTCGGCCTGATCCGCGAGGGCGAAGGCGTCGCCGCGCAGGTCCTGGTCAAGCTGGGCGCGGACCTCAACCGCG TCCGCCAGCAGGTGTTGCAGCTCCTGTCCGGCTACTCCACCAGCAAGGAGACGGCGGAGTCCGGCGGCCGCGGTGAGGGC ACCCCGTCCTCGTCCCTGGTCCTCGACCAGTTCGGGCGCAACCTGACCGCCAGCGCGCGGGAGGGCAAGCTCGACCCGGT GATCGGGCGCACCAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTCCTGATCGGCG AGCCCGGCGTGGGCAAGACCGCCGTGGTCGAGGGGCTGGCGCAGATGGTCGTCAAGGGCGAGGTGCCCGAGACGCTCAAG GACAAGCAGCTCTACACCCTCGACCTGGGCTCGCTGGTGGCCGGCTCGCGCTACCGCGGTGACTTCGAGGAGCGCCTGAA GAAGGTGCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGATCCACACGTTGGTGGGGGCGGGTG CGGCGGAGGGCGCGATCGACGCGGCCTCGATCCTGAAGCCGATGCTGGCGCGGGGCGAGTTGCAGACGATCGGCGCGACC ACGCTCGACGAGTACCGCAAGTACGTCGAGAAGGACCCCGCCCTGGAGCGCCGGTTCCAGCCGATCCAGGTCGGCGAGCC GTCGCTGGAGCACACGATCGAGATCCTCAAGGGTCTGCGCGACCGGTACGAGGCCCACCACCGGGTGTCGATCACCGACT CGGCGCTGGTGGCCGCGGCGACGCTGGCCGACCGGTACATCAACGACCGGTTCCTGCCGGACAAGGCCATCGACCTCATC GACGAGGCGGGCGCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCCGA CGTGCGTCGCGAGAAGGAATCCGCGATCGACGCGCAGGACTTCGAGCGCGCCGCCAAGCTGCGCGACTCCGAGAAGCAGC TGCTGGGCCAGAAGGCCGAGCGGGAGAAGCAGTGGAAGGACGGCGACCTCGACGTCGTCGCCGAGGTGGACGACGAGCAG ATCGCCGAGGTCCTGGCGAACTGGACCGGCATCCCGGTGTTCAAGCTCACCGAGGAGGAGACCACCCGGCTGCTCCGCAT GGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGTCGACGCGGTCAAGGCCGTGTCGCAGGCGATCCGCCGCACCCGCG CCGGTCTGAAGGACCCGAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGCGTGGGCAAGACCGAGCTGTCC AAGGCGCTGGCGCAGTTCCTGTTCGGCGAGGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGACCGGTACAC CGCGTCGCGGCTGTTCGGTGCCCCTCCCGGCTACGTCGGCTACGAAGAGGGTGGCCAGCTCACCGAGAAGGTGCGCCGCA AGCCGTTCTCGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCACCAGGAGGTGTACAACACGCTGCTCCAGGTGCTGGAG GACGGCCGGCTGACCGACGGTCAGGGCCGGACGGTGGACTTCAAGAACACCGTCATCATCTTCACGTCCAACCTGGGCAC GTCGGACATCTCCAAGGCCGTGGGCCTGGGCTTCACCTCCGGCCAGGACACCGCGTCGAACTACGAGCGGATGAAGAACA AGGTCAACGACGAGCTGAAGAAGCACTTCCGCCCGGAGTTCCTCAACCGCATCGACGACATCATCGTGTTCCACCAGCTG ACGCAGGACGAGATCATCAAGATGGTCGACCTGATGATCGCCCGCGTCGAGACGCAGCTGAAGAACAAGGACATGGCGAT CGAGCTGACCGACCGGGCCAAGATGCTGCTCGCCAAGCGCGGCTTCGACCCGGTGCTCGGCGCCCGTCCGCTGCGTCGCA CGATCCAGCGCGAGATCGAGGACCAGCTCTCGGAGAAGATCCTGTTCGGCGAGATCCAGCCGGGCCAGATCATCATCACC GACGTCGAGGGCTGGGACGGCGAGTCGGAGGCGGACGACAAGGCCCACTTCGTCTTCCGGGGTGAGTCGAAGCCGCTCAG CGTGCCCGACGCTCCGCCGGTCGACCTGGCCGCGTCCTCCGGTGCGAGCGCCGGTGGCGACGCGGGTGAGGGCGAAGCCG ATTCGGCCTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLLSGYSTSKETAESGGRGEG TPSSSLVLDQFGRNLTASAREGKLDPVIGRTKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQMVVKGEVPETLK DKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT TLDEYRKYVEKDPALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLI DEAGARMRIRRMTAPPDLREFDEKIADVRREKESAIDAQDFERAAKLRDSEKQLLGQKAEREKQWKDGDLDVVAEVDDEQ IAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQVDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS KALAQFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEVYNTLLQVLE DGRLTDGQGRTVDFKNTVIIFTSNLGTSDISKAVGLGFTSGQDTASNYERMKNKVNDELKKHFRPEFLNRIDDIIVFHQL TQDEIIKMVDLMIARVETQLKNKDMAIELTDRAKMLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEIQPGQIIIT DVEGWDGESEADDKAHFVFRGESKPLSVPDAPPVDLAASSGASAGGDAGEGEADSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 79 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-94 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007034575.1 | putative ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 61 |
| clpC | YP_007034575.1 | putative ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 1e-145 | 49 |
