Gene Information

Name : afsQ1 (BN6_34910)
Accession : YP_007037661.1
Strain : Saccharothrix espanaensis DSM 44229
Genome accession: NC_019673
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein AfsQ1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3780035 - 3780700 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
GTGCTGTTGATCGAAGACGACCAGGCCGTCCGCGACGGGCTGCGACTCGCGCTGACCAGGCAGGGTCACGCGGTGCGGGC
GGTCGAGTCGGGGGAGCGCGGGCTGGCGGGGCTGGCCGGTGTCGAGGTCGTGGTGCTGGACCTGATGCTGCCCGGGATGG
ACGGTTTCGAGGTGTGCCGCCGGATCCGCGCCGCCGGCACCCTGCCGATCATCATGCTCACCGCGCGCAGCGACGACATG
GACGTGGTGGCGGGCCTGGAGGCGGGCGCGGACGACTACGTGGTCAAACCGGTGCGGCCCAGGGTGTTGGAGGCGCGCAT
CCGGGCGGTGCTGCGCCGGACCGGCGAGTCGGCGCTGCGGGCCGACACCGAGCGGCACGGCGAGCTGACCATCGACCGGG
CGGGCCTGGTCGTGCGCAAGGACGGCGAACCCGTCGCCCTCGCGCCGACCGAGCTGCGCCTGCTGCTCGAACTGTCCCGC
TCGCCCGGCCGGGTGTTCAGCCGGCAGCAACTGCTCGAATCCGTGTGGGAGCACGGGTACCTCGGCGACTCCCGGCTGGT
GGACGCCTGCGTGCAGCGCCTGCGGTCGAAGATCGAGAACGACCCGGCGGCGCCGCGGTTCGTCCAGACCGTGCGGGGCT
TCGGCTACCGGTTCGGGCCGCTGTGA

Protein sequence : 
MLLIEDDQAVRDGLRLALTRQGHAVRAVESGERGLAGLAGVEVVVLDLMLPGMDGFEVCRRIRAAGTLPIIMLTARSDDM
DVVAGLEAGADDYVVKPVRPRVLEARIRAVLRRTGESALRADTERHGELTIDRAGLVVRKDGEPVALAPTELRLLLELSR
SPGRVFSRQQLLESVWEHGYLGDSRLVDACVQRLRSKIENDPAAPRFVQTVRGFGYRFGPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-22 42
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afsQ1 YP_007037661.1 Transcriptional regulatory protein AfsQ1 AE000516.2.gene3505. Protein 3e-28 44
afsQ1 YP_007037661.1 Transcriptional regulatory protein AfsQ1 BAC0197 Protein 3e-18 42
afsQ1 YP_007037661.1 Transcriptional regulatory protein AfsQ1 HE999704.1.gene2815. Protein 5e-31 41
afsQ1 YP_007037661.1 Transcriptional regulatory protein AfsQ1 BAC0125 Protein 9e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afsQ1 YP_007037661.1 Transcriptional regulatory protein AfsQ1 VFG1389 Protein 9e-17 43
afsQ1 YP_007037661.1 Transcriptional regulatory protein AfsQ1 VFG1563 Protein 2e-22 42
afsQ1 YP_007037661.1 Transcriptional regulatory protein AfsQ1 VFG1390 Protein 6e-23 41