Gene Information

Name : BN6_26970 (BN6_26970)
Accession : YP_007036882.1
Strain : Saccharothrix espanaensis DSM 44229
Genome accession: NC_019673
Putative virulence/resistance : Virulence
Product : ABC-type iron-siderophore transporter, permease subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2859458 - 2860447 bp
Length : 990 bp
Strand : +
Note : -

DNA sequence :
GTGCTGAGCAGATCGGCCGGACTCCTGCTGTGCCTGGTCGCCCTCGCGGGGTTCGCGGTGCTCAGCATCGCGGTCGGCGC
GCGGTCGGTGCCGCTCTCGACGGTGTTCGACGCCCTGTGGTCGTCGGAGGCCTCCTATGACACGCTGGTCGTTGCGCAGC
AACGGGTTCCGCGCACCGTCCTGGGCATCCTGGTGGGTGCCGCGCTGGGCCTGGCGGGCGCGCTGATGCAGTCGCTGACC
CGCAACCCGTTGGCGGACCCCGGTTTGCTGGGCGTCAACAGCGGCGCGGCGGCGGCCGTCGTGACCGCGATCAGCTTCTT
CGGCCTGACCAGCCCGCTGGAGTACGTGTGGTTCGCGTTCTTCGGCGCCGCCGCCGCGGCCCTGGTGGTCTACGGGCTGG
GCAGCTCCGGCCGGGCCGGCGGGCCGGTGCGGCTGGCGTTGGCGGGCACGGCGATCAGCGCGGTGCTCGTGGCCTACACG
TTCGCCGTGCAGTTGGCCGACGACAAGGCGTTGGACCAGTTCCGGTTCTGGATCGTCGGCGGGCTCGCCGGGCGCGACCT
CGACGTGCTGGTGCGGGTCGGGCCGATGCTCGCGCTGGGCGTGGTGATCGGGTTGGCGCTCGCGCGCCCGCTGAACGTGA
TCGCGCTGGGCGACGAGACCGGGCGCGCGCTGGGCGCGAACCTGGGCAAGGTGCGGCTGTCCGCCGCCGCCGCGATCACG
TTGCTGTGCGGTGCCGCGACGGCCGCCGCCGGCCCGTTCTCGTTCATCGGTCTGACCGTTCCGCACATCGCGCGGTCCCT
GGTCGGGGCCGACCAGCGCTGGGTGCTGCCGTTCTCGGCGGTGCTCGCGCCGTGCCTGCTGCTGGGCGCCGACGTGGTCG
GGCGCGTGGTGCTGCCGCCGAGCGAGCTGGAAGCGGGCCTGGTGACGGCATTCCTCGGCGCGCCGGTCTTCATCGCGTTG
GTGCGCGGGAGAAAGGTCCCCCAGCTGTGA

Protein sequence :
MLSRSAGLLLCLVALAGFAVLSIAVGARSVPLSTVFDALWSSEASYDTLVVAQQRVPRTVLGILVGAALGLAGALMQSLT
RNPLADPGLLGVNSGAAAAVVTAISFFGLTSPLEYVWFAFFGAAAAALVVYGLGSSGRAGGPVRLALAGTAISAVLVAYT
FAVQLADDKALDQFRFWIVGGLAGRDLDVLVRVGPMLALGVVIGLALARPLNVIALGDETGRALGANLGKVRLSAAAAIT
LLCGAATAAAGPFSFIGLTVPHIARSLVGADQRWVLPFSAVLAPCLLLGADVVGRVVLPPSELEAGLVTAFLGAPVFIAL
VRGRKVPQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 5e-25 44
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 5e-25 44
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 5e-25 44
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 5e-25 44
fecC AAL08453.1 FecC Virulence SRL Protein 3e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN6_26970 YP_007036882.1 ABC-type iron-siderophore transporter, permease subunit VFG0926 Protein 3e-34 49
BN6_26970 YP_007036882.1 ABC-type iron-siderophore transporter, permease subunit VFG1044 Protein 2e-14 41