|
Name : kdsD (PputUW4_00782) Accession : YP_007027794.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 939451 - 940425 bp Length : 975 bp Strand : - Note : [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation DNA sequence : ATGAGCCAATCCAGCGACCTGATTCAATCAGCACAACGCACCATCCGCCTCGAAGTAGAAGCCGTGCAAGGCCTGCTACC CCAAATCGACGCAGATTTCGTACGCGCTTGCGAGATGATTCTGGCCAGCAAAGGCCGCGTGGTCGTGGTCGGCATGGGCA AATCGGGGCACATCGGCAACAAGATCGCCGCGACCCTGGCCAGCACCGGCACCACGGCATTTTTTGTGCACCCGGCGGAA GCCAGCCATGGTGACATGGGCATGATTACCCGCGACGACATCATTCTGGCGCTCTCGAACTCCGGCTCCACCAATGAAAT CGTCACCCTGCTGCCACTGATCAAGCGCCTGGGCATACAGTTGATCAGCATGACCGGCAACCCTGATTCGCCGCTGGCCA AGGCCGCCGAGGTCAACCTGAATGTTCACGTCGAACACGAAGCCTGCCCGCTGAACCTGGCACCCACCTCGTCGACCACC GCCGCCCTGGTCATGGGCGACGCCCTGGCGGTCGCGCTGCTGGAAGCCCGTGGCTTCACCGCCGAAGACTTCGCCTTTTC CCATCCCGGCGGCGCCCTGGGCCGACGCCTGCTGCTGAAAGTGGAAAATGTCATGCACGCCGGCCAGGAACTGCCGCAGG TCCAGCGCGGCACCCTGCTCAAGGATGCCTTGATGGAAATGACCCGCAAGGGCCTGGGCATGACCGTCATCCTCGAGGCC GACGGCAAGCTGGCCGGAATCTTCACCGATGGTGATTTGCGCCGCACACTGGACCGCAGCATCGACATCCACAGCGTTGT CATCGACCAGGTCATGACAGCCCATGGCAAGACCGCCCGCGCCGAAATGCTGGCCGCCGAAGCACTGAAAATCATGGAAG ACCATAAAATCAGCGCGCTGGTCGTGGTCGACAGCGAAGACCGCCCGGTCGGCGCCTTGAACATGCACGACTTGCTGCGT GCAGGAGTAATGTAA Protein sequence : MSQSSDLIQSAQRTIRLEVEAVQGLLPQIDADFVRACEMILASKGRVVVVGMGKSGHIGNKIAATLASTGTTAFFVHPAE ASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIQLISMTGNPDSPLAKAAEVNLNVHVEHEACPLNLAPTSSTT AALVMGDALAVALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILEA DGKLAGIFTDGDLRRTLDRSIDIHSVVIDQVMTAHGKTARAEMLAAEALKIMEDHKISALVVVDSEDRPVGALNMHDLLR AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 7e-59 | 45 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-58 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-58 | 44 |
