|
Name : PputUW4_00672 (PputUW4_00672) Accession : YP_007027684.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : SNF2 family DNA/RNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 800682 - 803717 bp Length : 3036 bp Strand : + Note : [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family DNA sequence : ATGATCATGGGGCTAGCTGACATCTTCAAAAGCTTGCTGGGGGAAGGGGGGGCAACGCTAAGTAACCAGCAGGGCTTCTC CCACGCGGCGGACTCGGATGGTGTGAATTTCTATCTGGACAAGACAGCGTATACAGCGTTGTTGGAGGGAAAGGGAAATT CCTTGCAGAAGGTCCAGATGGTCGTTCTGCGCATGATGCAGGAGCAGGGCATAGCTGAGCCCCTGGCCAATGGATTTCAT GTTGCTGCCGAGGACGTTGCAGGCACGGATGAAGAGCAGGCGGAAATTCTTCGGTTGCCGCGACGCTTCAACATGACCTT CGCCAGTAAGATCGGTGGTAGAACGGGGAATAGCGGTTTCCGCATTGATCTGGCGGTTCTTTCCGAGTCCGTTGAAGTAC CTTTCACTCGCAAAGGGCCACTGCTTTTTCTCACTTCAACAGAGTCCTATCGACTGACCCCGGCCGAGTTGATGGGTTTG ATGGCTTGGGAACGCCATCAGAATTTGCTTCCCGAGCAACGAGGGGAGGCAGCCAACCTGCGTATGATGGCCGAGCTGCA GACTGCGGCTCGCAGTGGTATGCGTATCGACCTCAGCCATTTCGACAGGCTGGATGTGGTGGTGCCTGAAAATATCGGTG TCATTGCAACTCGATTGCCCGATGGCAGCCTAATGCTCAGCCCCAGCTTGGGAGATGGCTCTACGCCGGACCAATTAGAG AAGCGCTGGTCGCAATTGGATATAGGGGCCGATGGCGGTGTTTTGCGAATCGACAATCGCGTGGTGCTTCTCGAGCCGCA GAAAATGGCGGCGATCAAGGAGGTTCTGAGTAACAAGCGTATTCCTGCTGACAAAGTGGCCGAATTCATCGCTACTCCCA GTGCTTTCCTGGATGCGGCCCTGGTCAATCTCGATCTTGGTTTCTCAATTCGTGTCACCGGAATCGGCAAGCTCCAGCAC ATGGAGTTTGGTGACCTGGACAATCGGAAGAATGACTGGTTCGCGCTTGACTCACGGCCGGCGCCCGCAGAGATCATTCC GACCCTGGTGCAATCCGAAGAGGACTTGGTGCGCTTCAACGAAGTCTACAAGGCTGCCAAGGAGCAGGGCGCAGACAGCA TTATTTTCGCCGGAGAAGTCATTGATATCTCCGACCATGTTCGAATCGATGAGCAGCTGAAGACAGTCGAGAGGTCCCTG GTAGACCCGGAAACCGACTTACCTTCTGATGAGGAACCATCGGTGGGTCCGAAGGAGCGAGTCAGCGTACTGCTGCACGA TGCCGACGAGATAAACAGTGCTTTGCTGCGTAAGGCAAGTGAGGCCAAACCAGCGCATGAGCCTAATTGGGGAGCCTATG CTCGCCAGCCGTTCCCGCACCAGCGGGAGGGTGTCGAATGGATGCTGGGGCTGCTGGAGTCGGCAGTTCAGGATGATCAT GGTGATCTATACCGGCTTCAGGGGGGGCTGCTGGCCGACGACATGGGCCTTGGCAAAACTTACATGTCATTGGTGACGGT GGGTGAATACCTTGCCCGTCAGAAAGTTGCGGAACGTGCGCAGAAGCCAGTTCTGGTCGTGGCTCCCTTAAGCCTCCTGG AGAATTGGGAGGATGAGGTCAATCAAACTTTCAAGGGCATCCCTTTCCGGGACATCGTGGTACTACAGTCGGGAAGGGAT CTGAGTCGCTTCAAGGTCAAGGGGGCTGAGCGGGAATCGGCACAGCTGGCTTCTCTGATTGATGAGGATGGAGTGATGGC TGACGATGCCATTCGTTACGCTCTTTCCATCGGCCCGGAGGCTGGGGTACATCGTCTGGACATGGATCGCCGCCTTGTAC TGACCACTTATCAGACACTCAGGGATTACCAGTTTTCACTGTGCAGGATTGACTGGGGCTTGGTGATCTTCGACGAAGCG CAGAACATCAAGAATCCCAATGCTGCGCAGACGCGAGCGGCAAAAGGACTGAAGGCGGATTTCAAGCTGCTGGCAACTGG CACACCGGTCGAGAATAGCCTGGGAGATTTCTGGTGCCTGATGGACACCGCGCAGCCAGGCATTCTCGGAGGATGGGGCC AGTTCCGCGATAGCTGGATCAAACCAATCCTGTCCGCAGCAGAGGATGAAAAGGATGAGATAAGGCGGAAGTTTGGCGCG GGGCTACGCGAGGCCGTCGGCAGGTTTATGCTCCGTCGCATCAAGGAAGATCAGCTGAAGGGGCTTCCCAGCAAGACGAT CTATAGCGGTGTGGAGCAGCCGAAGGGCGGCCAGCAGCTACATGCGGCACATCTTTCCGTTTGTATGAAGGGTGCCCAGC TACAGGCGTACGATGCAGTACTAAATGATTTTCGTGCTCGACGTGCGACCGAGGACATGCGAGGTACTGCACTGGCGGCA TTGGCCCAGTTGCGTGAGATCTCACTCCATCCGCGTCTTCGCGAAGAAACAAAACTGATGGCCAGCAATGCCAGCGAGGC GCGCGCAAACATGGCGCAGTCGGGGAAGTTGGTAGTGCTGCTGGAGTTACTTGATCGTATCCGGCAGAACGAAGAGAAGG TCATTTTGTTCATGGTCACCAAGCGGCTTCAGAGAATACTGAAGCTTTGGTTGGACCAGATCTATGGACTGGATGTGGCA GTTATCAATGGTGACACGGCGGCAGTTGCAAAGAAATCTGACGAGTTGACTCGCAAGAAACTGATCACTGTTTTCGAATC GAAGCCTGGTTTCAACGTGATGATCATGTCACCAGTAGCTGCAGGGGTTGGATTGACAGTGGTTGGTGCCAACCATGTTG TGCACTTGGAGCGCCACTGGAACCCTGCAAAGGAAGCGCAGGCATCTGACCGAGTCTATCGAATTGGTCAGAAGAAAGAC GTGCACATTCATCTTCCTGCTGTACGACACCCGCAATTTGATTCGTTCGATGTTCATTTGGATCGCCTACTTCGAGGCAA GCTGATGCTAAAGGATGCGGTCGTGACGCCTGAAGCGGTTAGCGAGAGTGAGATGGTTCAATCCATGGGGCTTTGA Protein sequence : MIMGLADIFKSLLGEGGATLSNQQGFSHAADSDGVNFYLDKTAYTALLEGKGNSLQKVQMVVLRMMQEQGIAEPLANGFH VAAEDVAGTDEEQAEILRLPRRFNMTFASKIGGRTGNSGFRIDLAVLSESVEVPFTRKGPLLFLTSTESYRLTPAELMGL MAWERHQNLLPEQRGEAANLRMMAELQTAARSGMRIDLSHFDRLDVVVPENIGVIATRLPDGSLMLSPSLGDGSTPDQLE KRWSQLDIGADGGVLRIDNRVVLLEPQKMAAIKEVLSNKRIPADKVAEFIATPSAFLDAALVNLDLGFSIRVTGIGKLQH MEFGDLDNRKNDWFALDSRPAPAEIIPTLVQSEEDLVRFNEVYKAAKEQGADSIIFAGEVIDISDHVRIDEQLKTVERSL VDPETDLPSDEEPSVGPKERVSVLLHDADEINSALLRKASEAKPAHEPNWGAYARQPFPHQREGVEWMLGLLESAVQDDH GDLYRLQGGLLADDMGLGKTYMSLVTVGEYLARQKVAERAQKPVLVVAPLSLLENWEDEVNQTFKGIPFRDIVVLQSGRD LSRFKVKGAERESAQLASLIDEDGVMADDAIRYALSIGPEAGVHRLDMDRRLVLTTYQTLRDYQFSLCRIDWGLVIFDEA QNIKNPNAAQTRAAKGLKADFKLLATGTPVENSLGDFWCLMDTAQPGILGGWGQFRDSWIKPILSAAEDEKDEIRRKFGA GLREAVGRFMLRRIKEDQLKGLPSKTIYSGVEQPKGGQQLHAAHLSVCMKGAQLQAYDAVLNDFRARRATEDMRGTALAA LAQLREISLHPRLREETKLMASNASEARANMAQSGKLVVLLELLDRIRQNEEKVILFMVTKRLQRILKLWLDQIYGLDVA VINGDTAAVAKKSDELTRKKLITVFESKPGFNVMIMSPVAAGVGLTVVGANHVVHLERHWNPAKEAQASDRVYRIGQKKD VHIHLPAVRHPQFDSFDVHLDRLLRGKLMLKDAVVTPEAVSESEMVQSMGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1359 | YP_001217302.1 | hypothetical protein | Not tested | VPI-2 | Protein | 0.0 | 46 |
| VPI2_0006c | ACA01823.1 | hypothetical protein | Not tested | VPI-2 | Protein | 0.0 | 45 |
