Gene Information

Name : PputUW4_00652 (PputUW4_00652)
Accession : YP_007027664.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 759673 - 760548 bp
Length : 876 bp
Strand : -
Note : [K] COG2378 Predicted transcriptional regulator

DNA sequence : 
ATGAAACGCAAACAATCCATCGAACAGGTCCGCTGGGACCTGGCACTTCGCTATCGCTTGATCGAGACAGTTGCCTGGTG
GGAGGGCCGGTTGACCACGGGACACTTGATACAGAGCTTCGGCATCAGCCGTCAGCAGGCGTCCAAGGACATCAACACCT
ACATCACGGAACATGCGCCCAAAAATCTTACATATGACAAAAAAATAAAGGGTTACATACCCAGCAAGACGTTCACCCCG
CTGTTCATCGACGACAGCGCCAGCGCCTATTTGCACCTGCTTTATCAGAACAACGAACGCGCCCCGCACATCGATGGACT
CGCCCTGGCCTACGCCCACACCAAGGTGCTGGAGGTCCCGGATCGCCCGATTCGCCCAGAGGTACTGCGCCCGCTGCTCA
AAGCGTGTCGCGATGGCCTGCGCCTGGAAACCGAGTACGTGTCACTCAACACACCGAACGTGGAAATTCGCCTCATCGCC
CCTCACACACTGGTCTACACCGGTATGCGCTGGCATGTGCGGGCGTACTGTGAAAAGAACGGCCAGTACCGCGACTTTGT
ACTCAGCCGTCTACGGGGCCAGCCGGATTTGCTCGACGAATCGCCGAACACTCGTGAGCTGGATGAAGACTGGAACACCG
AGATCCCGGTCATCTTTGCAGCCGATGGGCGATTGAACACGGCGCAGAAGTCAATCATCGAAACTGACTTCGGCATGGTT
GATGGCCAACTGGAGGTGCCCAGTCGCAGGGCGCTGGTGAAGTATGTATTGCAACGCTATCAGATCGACCCCAGGAACCT
GACCACCAATCCTGAAGCGCAACAAATCGTGGTGACCAATCTCAAGGAACTGAAGCCTTGGCTTATGAATGATTGA

Protein sequence : 
MKRKQSIEQVRWDLALRYRLIETVAWWEGRLTTGHLIQSFGISRQQASKDINTYITEHAPKNLTYDKKIKGYIPSKTFTP
LFIDDSASAYLHLLYQNNERAPHIDGLALAYAHTKVLEVPDRPIRPEVLRPLLKACRDGLRLETEYVSLNTPNVEIRLIA
PHTLVYTGMRWHVRAYCEKNGQYRDFVLSRLRGQPDLLDESPNTRELDEDWNTEIPVIFAADGRLNTAQKSIIETDFGMV
DGQLEVPSRRALVKYVLQRYQIDPRNLTTNPEAQQIVVTNLKELKPWLMND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 5e-67 49
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 1e-67 48
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 1e-67 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputUW4_00652 YP_007027664.1 transcriptional regulator VFG1105 Protein 4e-68 48