Gene Information

Name : rph (PputUW4_05332)
Accession : YP_007032326.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 6060591 - 6061313 bp
Length : 723 bp
Strand : -
Note : [J] COG0689 RNase PH

DNA sequence :
ATGATACGTCCAAGTGGTCGCGCTGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAACACGCCGAGGG
TTCTGTGCTGGTCGAGTTCGGTGATACCAAGGTCATCTGCACCGTCAGCGTTGAACCGGGCGTACCGCGTTTCCTGAAAG
GCCAGGGCCAGGGCTGGCTGACCGCCGAGTACGGCATGCTGCCACGGGCCACTGGCGAGCGTAACCAGCGTGAAGCCAGC
CGTGGCAAGCAAGGCGGCCGTACGCTGGAAATCCAGCGTCTGATCGGCCGTTCCCTGCGCGCTGCGCTGGACATGACCAA
GCTGGGCGACGTCACCCTGTACGTCGACTGCGACGTGATCCAGGCAGACGGTGGCACCCGTACTGCGTCGATCACCGGTT
CCATGGTCGCGCTGATCGATGCCTTGAAAGTGATCAAGAAGCGTGGCGGCCTGAAAGGCGGCGACCCGGTCAAGCAGATG
ATCGCCGCTGTTTCCGTGGGCATGTACAAGGGCGAGCCTGTGCTCGACCTCGACTACCTGGAAGACTCGGCCGCCGAAAC
CGACCTGAACGTGGTGATGACCAGTGCTGGCGGTTTCATTGAAGTACAGGGCACTGCCGAAGGCGCGCCGTTCCAGCCTG
AAGAGCTGAACGCCATGCTGGAACTGGCGAAGAAAGGCATGAACGAGATCTTCGAACTGCAAAAGGCCGCATTGGCCGAC
TGA

Protein sequence :
MIRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVEPGVPRFLKGQGQGWLTAEYGMLPRATGERNQREAS
RGKQGGRTLEIQRLIGRSLRAALDMTKLGDVTLYVDCDVIQADGGTRTASITGSMVALIDALKVIKKRGGLKGGDPVKQM
IAAVSVGMYKGEPVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEELNAMLELAKKGMNEIFELQKAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-63 60