Gene Information

Name : ssuB (PputUW4_05209)
Accession : YP_007032203.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates transport ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5935276 - 5936082 bp
Length : 807 bp
Strand : -
Note : [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

DNA sequence : 
ATGATCGCGGAACAACCTCCACGCCTGCTGCGCGGCATTCCGCTGGCGGTGCGCAAGCTGCAAAAAACCTTTGGCTCGCG
GCAGGTGCTGCGCGAAATCGACCTGCACATTCCGGCGGGCCAGTTTGTCGCCGTGGTGGGGCGTAGCGGTTGCGGCAAAA
GTACCTTGCTGCGATTGCTCGCCGGCCTTGACCGGCCCACCGGTGGTGAATTGCTCGCCGGTGCCGCCCCATTGAGCGAT
GCGCGGGAAGACACGCGGCTGATGTTCCAGGAAGCGCGTTTGCTGCCCTGGAAAAAGATCATCGACAACGTCGGTCTGGG
CCTCAAGGGCAACTGGCGACCGCAAGCGCTTGAAGCCTTGGAAGCGGTGGGCCTGGCCGACCGCGCCAACGAATGGCCGG
CAGCGTTGTCCGGTGGACAGAAGCAACGCGTGGCTTTGGCCCGTGCGTTGATTCATCAGCCGCGCCTGCTGTTGCTCGAC
GAACCCCTGGGCGCTCTGGATGCCCTGACCCGAATTGAAATGCAGCAACTGATCGAACGGCTCTGGCAGCAGCACGGCTT
CACGGTGTTGCTGGTGACCCATGACGTCAGTGAAGCGGTGGCGATTGCCGATCGGGTGATCCTGATCGAAGACGGTGAAG
TCGGCCTCGACCTGCACGTGGAACTGCCGCGCCCTCGAGTGCGCGGCTCCCACCGGCTGGCGGCGCTGGAAACCGAAGTC
CTCAATCGCGTGCTGGCGCTACCCGGCCAGCCGCCGGAACCGGAACCTGTTTCACCCTTGCCTACGCAATTGCGCTGGGC
TCAATAA

Protein sequence : 
MIAEQPPRLLRGIPLAVRKLQKTFGSRQVLREIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDRPTGGELLAGAAPLSD
AREDTRLMFQEARLLPWKKIIDNVGLGLKGNWRPQALEALEAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLLLD
EPLGALDALTRIEMQQLIERLWQQHGFTVLLVTHDVSEAVAIADRVILIEDGEVGLDLHVELPRPRVRGSHRLAALETEV
LNRVLALPGQPPEPEPVSPLPTQLRWAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-37 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_007032203.1 aliphatic sulfonates transport ATP-binding subunit NC_008702.1.4606598. Protein 1e-15 41
ssuB YP_007032203.1 aliphatic sulfonates transport ATP-binding subunit NC_012469.1.7686878. Protein 3e-21 41