Gene Information

Name : aldA (PputUW4_04800)
Accession : YP_007031795.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 5490518 - 5492038 bp
Length : 1521 bp
Strand : +
Note : [C] COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGCGTTACGCTCACCCCGGTACTGAAGGCGCTATCGTTTCGTTCAAAGCCAAATACGGTAACTACATCGGCGGCGAGTT
CGTCGCGCCTGTCAAAGGTCAGTACTTCACCAATACCTCGCCAGTGAATGGCCAACCGATTGCCGAATTCCCCCGCTCCA
CGGCCGAAGACATCGACAAGGCCCTGGATGCTGCCCACGCCGCCGCCGATGCCTGGGGTGCCACGTCCGCCCAGGCGCGC
TCGTTGGTGCTGCTGAAAATCGCCGACCGCATCGAACAGAACCTGGAACTGCTGGCAATCACCGAATCCTGGGACAACGG
CAAGGCCGTGCGCGAAACCCTCAACGCCGACATCCCGCTGGCCGCCGACCATTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAAGGCAGCGCTGCCGAAATCGACGGCAACACCGTGGCCTATCACATCCATGAACCCCTCGGCGTGGTCGGCCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCGTGGAAACTCGCCCCGGCGCTGGCTGCTGGCAACTGCGTGGTACT
CAAACCCGCCGAGCAAACCCCGCTGGGCATCACCGTACTGGTCGAACTGATCGGCGACTTGCTGCCACCGGGCGTGCTGA
ACATCGTGCAAGGCTTCGGCAAAGAAGCCGGCGAAGCCCTGGCCACCAGCAAACGCATCGCCAAGATCGCCTTCACCGGC
TCGACCCCGGTCGGTTCGCACATCATGAAATGCGCGGCGGAAAACATCATTCCGTCCACCGTGGAGCTGGGCGGCAAATC
GCCGAACATCTTCTTCGAAGACATCATGAAGGCCGAACCGTCCTTCATCGAGAAAGCCGCTGAAGGCCTGGTGCTGGCAT
TCTTCAACCAGGGCGAAGTCTGCACCTGCCCTTCCCGCGCTCTGGTGCAAGAGTCGATCTACGACGAGTTCATGGCCGTC
GTGATGAAGAAGGTCCTGCAAATCAAACGCGGCGACCCGCTGGACACCGAGACCATGGTCGGCGCCCAGGCGTCCGAGCA
GCAGTTCGACAAGATCCTTTCGTACCTGGAAATCGCCAAGGGCGAAGGTGCCGAGTTGCTGACCGGCGGCAAGGTGGAAA
AACTCGAGGGCAACCTGGCGAGCGGGTATTACATCCAGCCGACGCTGCTCAAGGGCACCAACAAGATGCGTGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTGAGCATCACCACCTTCAAGGACGAAGCCGAAGCCCTGGCCATCGCCAACGATACCGA
GTTCGGCCTCGGTGCCGGCCTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGTCGCGCCATCAAGGCCGGTCGTG
TGTGGACCAACTGCTATCACCTGTACCCGGCGCACGCCGCGTTCGGCGGTTACAAGAAGTCCGGCGTCGGCCGTGAAACC
CACAAGATGATGCTTGACCACTATCAGCAGACCAAAAACCTGCTGGTGAGCTACGACATCAATCCGTTGGGCTTCTTCTA
A

Protein sequence :
MRYAHPGTEGAIVSFKAKYGNYIGGEFVAPVKGQYFTNTSPVNGQPIAEFPRSTAEDIDKALDAAHAAADAWGATSAQAR
SLVLLKIADRIEQNLELLAITESWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGSAAEIDGNTVAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLVELIGDLLPPGVLNIVQGFGKEAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMKAEPSFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYDEFMAV
VMKKVLQIKRGDPLDTETMVGAQASEQQFDKILSYLEIAKGEGAELLTGGKVEKLEGNLASGYYIQPTLLKGTNKMRVFQ
EEIFGPVVSITTFKDEAEALAIANDTEFGLGAGLWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-146 67
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-154 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-153 66
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_007031795.1 aldehyde dehydrogenase VFG0082 Protein 4e-147 67