Gene Information

Name : PputUW4_04568 (PputUW4_04568)
Accession : YP_007031565.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5236324 - 5237286 bp
Length : 963 bp
Strand : +
Note : [S] COG3272 Uncharacterized conserved protein

DNA sequence : 
ATGTCCCACGTCCCCGTCAAACCGAAAATAGCCATCAGCGCCTGCCTGATGGGGCTCGATGTGCGCTTCAACGGCGGGCA
CAAGGAGTCGCGCCTGTGCAGCCGTACCCTCACTGATTACTTCGATTTCATCCCGGTCTGCCCGGAAGTGGCCATCGGCC
TCGGCGTACCGCGCCAACCGATTCGGCTGGTGAGTGGCGCCGATCAACCCGAAGCCGTGGGAACACTGGATCACAACCTG
AACGTGACACAACCGCTGGCCACCTACGGCCGGGACATGGCAGCGCAGCTCGCGGGGGATATTTGCGGTTATATCTTCAT
GCAAAATTCCCCGTCCTGCGGCCTGGAGCGGGTCAAGGTCTACCACGCCAACGGCACACGAGCGGACAGTGGCGGTCGCG
GGATCTACGCCCAGGCCTTCTGCCTGATGCACCCGGACTTGCCGGTGGAGGAAGACGGCCGGCTCAACGATCCGGTGCTT
CGGGAAAATTTTCTCACCCGCGTATTCGCCTACAGCGCCTGGCAGCAGCTACGCCAGGAAGGCCTGACCCGGCGCGGCCT
CACGGACTTTCACTCACGCTACAAATACCTGCTGATGGCCCACAACCCGGTGCAATACAAAGCCCTGGGCCACCTGCTGG
GCAGCATGGGCAAAAACGATCCGCAGGAACTGGGCCCCCGCTATTTCAGCGAATTGATGGCGGCGTTGAAAAAGTGCGCC
ACCCGCCGCACCCATACCAACGTCCTGCAACACATCAGCGGTTACCTGAAACAGGCCATCAGCCGCGAAGACAAGCAGGA
AGTGCAACAGCTGATCAGCCAGTACCACCAAGGCATCGTGCCGCTGGTGGTGCCGCTGACGCTGCTCAAACATCACTTTC
GCCAACACCCCGATCCGTACATCGCACAGCAGGTCTATCTGCAACCGCACCCGGAAAACCTCAGCCTGCGAAACGCTATC
TGA

Protein sequence : 
MSHVPVKPKIAISACLMGLDVRFNGGHKESRLCSRTLTDYFDFIPVCPEVAIGLGVPRQPIRLVSGADQPEAVGTLDHNL
NVTQPLATYGRDMAAQLAGDICGYIFMQNSPSCGLERVKVYHANGTRADSGGRGIYAQAFCLMHPDLPVEEDGRLNDPVL
RENFLTRVFAYSAWQQLRQEGLTRRGLTDFHSRYKYLLMAHNPVQYKALGHLLGSMGKNDPQELGPRYFSELMAALKKCA
TRRTHTNVLQHISGYLKQAISREDKQEVQQLISQYHQGIVPLVVPLTLLKHHFRQHPDPYIAQQVYLQPHPENLSLRNAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 7e-61 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-60 42
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-60 42
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-60 42
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-60 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputUW4_04568 YP_007031565.1 hypothetical protein VFG0490 Protein 6e-61 42