Gene Information

Name : xerD (PputUW4_04429)
Accession : YP_007031426.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5083835 - 5084731 bp
Length : 897 bp
Strand : -
Note : [L] COG4974 Site-specific recombinase XerD

DNA sequence :
ATGCCTGCCATTGATCATCCCCTGATAGACCAGTTCCTCGACGCCCTCTGGCTGGAGAAAGGCCTTTCCGACAACACCCG
CGATGCCTATCGCAGTGACCTGGCTCTGTTCAATGGCTGGCTGCAGGAAAAAGGCCTGGAGCCGATCAACGCCGGACGCG
AATTGATCCTCGATCACCTGGCCTGGCGCCTGGAGCAAAACTATAAGCCTCGTTCAACGGCAAGGTTTCTCTCTGGCGTG
CGTGGCTTCTATCGCTATCTGCTGCGGGAAAAGCTGATCGTCGTCGATCCGACCCTGCGCATCGATATGCCGCAACTGGG
TAGGCCATTGCCCAAATCCTTGTCGGAAGCAGACGTAGACGCGCTGTTGGCTGCACCGGACCTCAGCGAAGCCATCGGCC
AGCGTGACCGGGCGATGCTCGAAGTGCTTTATGCCTGTGGTCTGCGGGTGACGGAGCTGATCAGCCTGACCCTGGAGCAG
GTCAACCTGCGCCAGGGGGTGCTGCGCGTGATGGGCAAGGGCAGCAAGGAGCGGTTGGTGCCGATGGGCGAGGAGGCGAT
TGTCTGGATCGAGCGCTACATGCGTGATGCCCGCAGCGAACTGCTTGGCGGACGTCCCAGCGATGTGCTGTTTCCCAGCC
AGCGTGGCGAGCAGATGACGCGGCAAACTTTCTGGCATCGGATCAAGCACCAGGCCAAGGTCGCCGGGATTGGCAAGTCG
CTGTCGCCGCACACGCTGCGCCATGCCTTTGCTACGCACCTGCTCAACCACGGCGCAGACCTGCGGGTGGTGCAGATGCT
CCTTGGCCACAGCGATCTGTCGACCACCCAGATTTACACGCACGTCGCCAGGGCGCGGTTGCAGGATCTGCATGCCAAAC
ACCATCCACGGGGGTGA

Protein sequence :
MPAIDHPLIDQFLDALWLEKGLSDNTRDAYRSDLALFNGWLQEKGLEPINAGRELILDHLAWRLEQNYKPRSTARFLSGV
RGFYRYLLREKLIVVDPTLRIDMPQLGRPLPKSLSEADVDALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQ
VNLRQGVLRVMGKGSKERLVPMGEEAIVWIERYMRDARSELLGGRPSDVLFPSQRGEQMTRQTFWHRIKHQAKVAGIGKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-62 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-62 54