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Name : PputUW4_04344 (PputUW4_04344) Accession : YP_007031341.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : IS3 family transposase Function : - COG functional category : - COG ID : - EC number : - Position : 4990871 - 4992013 bp Length : 1143 bp Strand : - Note : [L] COG2801 Transposase and inactivated derivatives DNA sequence : TTGGATATGCGTAAATCTTATTCCAGTGAGTTCAAACTCAAGGCCGCCAGCATGGTGCTGGACGAGGGCCAGTCAGTTCC CGATGTTTGTGCCAGTTTGGATATTGGCCCTACGGCCTTGCGCCGTTGGGTCGACCAGGTTCGCAAAGAACGCTTGGGTT CGACCCCGGTGGGGGCCAAGGCAATCACCGCCGATCAGCGGGAGATTCAGCAGCTCAAAGCGTTGCTCAGGCAAAAAGAC CTGGACATTGAAATCCTAAAAAAAGGCCAGTGCTCTCCTGCTTTTGGACTCCAAAGATCATTCTCGCTGATCAATGAGCT GGACGAGCAGTACGGCGTTAACAATTGCTGTCGGGCGTTTGGAGTCACCCGCAGCAGCTTTTACGCCTGGCGTCAGCGTC AGGGCAAGGTGAATCCTGAGCGGGAGAAACTTAAGGCCGTGCTGGTCAAGCATCACAAGGAATCCAGAGCGTCCGCAGGG TCTCGCACCCTGTCCAAGGAACTGCAAGCCAAGGGGCATCGTGTCGGGCGACATATGGCTCGCAGCTTGATGCGCGAAGC CGGTGTTGCCAGCCATCAACGGCGGCGGCACAAGTACAAATCTTCCGGCGTTGAGGCGCTGGTGGCGCCGCATGTGCTCA AGCGCAAGTTTGATGTCACTGCGGTTAACCAAGTGTGGTGCGGCGATGTGACCTACATCAAAGTCGGCACGCGCTGGATG TATTTCGCGGCGGTGCTGGATCTGTTTGCCCGCAGGATCGTGGGCTGGTCGTTTTCGATGATTTCCGATGCCACGCTGAC CTGCGAAGCGTTGCGGATGGCGGTCGACCTGCGAGGCCGGCCAAAAGAGGTGCTGTTTCACTCTGACCAGGGCTGCCAAT ACACCAGTCATAAATTCAGGAAAGAAATGCGCAAACATGGCCTCCTGCAAAGCATGAGTCGCAAAGGTGAGTGCTGGGAC AACGCTCCGATGGAGCGTTTCTTTGGAAGCCTCAAGTCAGAGTGGGTACCAGAAGATGGCTACCGCTCGGAACATGAGGC GCGGGTGGATGTGCAGCGTTATGTGATGCGTTACAACAACGTCAGGCTCCATAGCTACAACGGCTACCGGTCGCCGGTAG CTATGGAGAAACTGGCGGCATGA Protein sequence : MDMRKSYSSEFKLKAASMVLDEGQSVPDVCASLDIGPTALRRWVDQVRKERLGSTPVGAKAITADQREIQQLKALLRQKD LDIEILKKGQCSPAFGLQRSFSLINELDEQYGVNNCCRAFGVTRSSFYAWRQRQGKVNPEREKLKAVLVKHHKESRASAG SRTLSKELQAKGHRVGRHMARSLMREAGVASHQRRRHKYKSSGVEALVAPHVLKRKFDVTAVNQVWCGDVTYIKVGTRWM YFAAVLDLFARRIVGWSFSMISDATLTCEALRMAVDLRGRPKEVLFHSDQGCQYTSHKFRKEMRKHGLLQSMSRKGECWD NAPMERFFGSLKSEWVPEDGYRSEHEARVDVQRYVMRYNNVRLHSYNGYRSPVAMEKLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RS04 | AAP82949.1 | putative transposase | Not tested | PAPI-2 | Protein | 2e-54 | 47 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-61 | 47 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-61 | 47 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 8e-61 | 47 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 8e-61 | 47 |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-61 | 47 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 6e-61 | 47 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-61 | 47 |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-61 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputUW4_04344 | YP_007031341.1 | IS3 family transposase | VFG1122 | Protein | 3e-61 | 47 |
