Gene Information

Name : pyk2 (PputUW4_04336)
Accession : YP_007031333.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 4976184 - 4977635 bp
Length : 1452 bp
Strand : +
Note : [G] COG0469 Pyruvate kinase

DNA sequence :
ATGTCCGTCCGTCGTACCAAAATCGTCGCCACCCTTGGCCCGGCCAGTAACTCGCCGGAAGTTCTCGAACAGCTGATTCT
GGCTGGCCTGGACGTCGCCCGCCTGAACTTCTCCCACGGCACCCCCGACGAGCACAAGGCTCGCGCGAAGCTGGTGCGTG
ACCTCGCTGCCAAGCACGGCCGCTTCGTCGCCCTGCTGGGTGACCTGCAAGGCCCGAAAATCCGTATCGCCAAATTCGCC
AACAAGAAGATCGAGCTGAAGATCGGTGATCAATTCACCTTCTCCACCAGCCATCCTCTGACCGAAGGCAACCAGCAAGT
GGTCGGCATCGACTATCCGGACCTGGTCAAGGACTGCGGTGTGGGCGACGAGCTGCTGCTCGACGACGGTCGCGTGGTGA
TGCGCGTCGATACCGCCACGGCCACCGAACTGAACTGCACCGTGACCATCGGCGGCCCGCTGTCCGACCACAAAGGCATC
AACCGTCGCGGTGGCGGCCTGACCGCTCCGGCCCTGACTGAAAAAGACAAGGCTGACATCAAGCTCGCTGCGGAAATGGA
AGTCGACTACCTCGCCGTGTCCTTCCCGCGTGACGCGGCCGACATGGAATACGCCCGTCAACTGCGCGACGAAGCCGGCG
GCACTGCCTGGCTGGTGGCGAAGATCGAACGCGCCGAAGCCGTGGCCGATGACGAAACCCTCGACGGCCTGATCAAGGCG
TCCGACGCGGTGATGGTTGCCCGTGGTGACCTGGGTGTGGAAATCGGCGACGCCGAACTGGTGGGCATCCAGAAGAAGAT
CATTCTGCACGCACGCCGCCACAACAAGGCGGTGATCGTCGCGACCCAGATGATGGAGTCGATGATCCAGAACCCGATGC
CGACCCGCGCCGAAGTGTCCGACGTGGCCAACGCCGTGCTCGACTACACCGACGCCGTGATGCTCTCGGCCGAAAGTGCC
GCTGGCCTGTACCCGCTGGAAGCCGTTCAGGCCATGGCGCGTATCTGTGTCGGTGCCGAAAAGCACCCGACCAGCAAGAC
CTCCAGCCACCGCATCGGCAAGGAGTTCCAGCGCTGCGACGAGAGCATTGCGCTGGCGACCATGTACACCGCCAACCACT
TCCCGGGCGTGAAGGCGATCATCGCCCTGACCGAAAGTGGCTACACCCCGCTGATCATGTCGCGCATCCGTTCCTCGGTG
CCGATCTACGCGTTCACCCCGCACCGCGAAGCCCAGGCTCGCGCGGCGATGTTCCGTGGCGTGTACACCATCCCGTTCGA
CCCGGCTTCGCTGGCGCCGAACGAAGTCAGCCAGAAGGCGATCGACGAGCTCGTCAAGCGCGGTGTAGTACAGAAAGGCG
ACTGGGTCATCCTGACCAAGGGTGACAGCTACCACACCACCGGCGGCACCAACGGCATGAAGATCCTGCACGTTGGCGAT
CCGATGGTCTGA

Protein sequence :
MSVRRTKIVATLGPASNSPEVLEQLILAGLDVARLNFSHGTPDEHKARAKLVRDLAAKHGRFVALLGDLQGPKIRIAKFA
NKKIELKIGDQFTFSTSHPLTEGNQQVVGIDYPDLVKDCGVGDELLLDDGRVVMRVDTATATELNCTVTIGGPLSDHKGI
NRRGGGLTAPALTEKDKADIKLAAEMEVDYLAVSFPRDAADMEYARQLRDEAGGTAWLVAKIERAEAVADDETLDGLIKA
SDAVMVARGDLGVEIGDAELVGIQKKIILHARRHNKAVIVATQMMESMIQNPMPTRAEVSDVANAVLDYTDAVMLSAESA
AGLYPLEAVQAMARICVGAEKHPTSKTSSHRIGKEFQRCDESIALATMYTANHFPGVKAIIALTESGYTPLIMSRIRSSV
PIYAFTPHREAQARAAMFRGVYTIPFDPASLAPNEVSQKAIDELVKRGVVQKGDWVILTKGDSYHTTGGTNGMKILHVGD
PMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 6e-78 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-60 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-60 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-60 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-60 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk2 YP_007031333.1 pyruvate kinase VFG0479 Protein 6e-61 44