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Name : spaP (PputUW4_03628) Accession : YP_007030625.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein Function : - COG functional category : - COG ID : - EC number : - Position : 4214266 - 4214925 bp Length : 660 bp Strand : - Note : [U] COG4790 Type III secretory pathway, component EscR DNA sequence : ATGAACGACGTTTCGCTGATCGCGCTGCTGGCGTTCGCTTCACTGCTGCCGTTTCTGGTGGCGGCCGGCACCTGCTACAT CAAGTTTTCCATCGTCTTTGTCATCGTGCGTAATGCCTTGGGCTTGCAGCAGGTGCCCTCGAACATGGCCCTCAATGCAA TCGCCTTGATGCTGGCGATTTTCGTGATGACGCCGGTGATGAAACAGGGCTATGGCTATTACAAGGAAGAACAGGTGGCT TTTACCGACATCGAGTCGGTGGTGAATTTCGCCGAGAACGGGTTGGGCGGCTACAAGGACTACCTGCGCAAGTACACCGA CCCGGAACTGGCTCTGTTCTTCGAGCGGGCGCAAGCGGTGCAGAGTGAGTCCGACATCGTTCTGCCCGCCGATGAAGAAC TCACGCCGTCGCTGTTTTCGCTGCTGCCGGCCTACGCATTGAGTGAAATCAAAAGCGCCTTCAAGATCGGCTTCTACCTG TACTTACCCTTTGTGATCGTCGACCTGGTGATCTCCAGCATCCTGCTGGCGCTGGGCATGATGATGATGAGCCCGGTGAT CATTTCGGTGCCGATCAAATTGGTATTGTTTGTTGCTCTGGACGGCTGGGCGCTGCTGTCCACCGGGCTGGTCAAGCAAT ACCTGACGTTGCTGGCATAG Protein sequence : MNDVSLIALLAFASLLPFLVAAGTCYIKFSIVFVIVRNALGLQQVPSNMALNAIALMLAIFVMTPVMKQGYGYYKEEQVA FTDIESVVNFAENGLGGYKDYLRKYTDPELALFFERAQAVQSESDIVLPADEELTPSLFSLLPAYALSEIKSAFKIGFYL YLPFVIVDLVISSILLALGMMMMSPVIISVPIKLVLFVALDGWALLSTGLVKQYLTLLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 4e-55 | 67 |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 9e-54 | 66 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 2e-51 | 65 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 2e-51 | 65 |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-51 | 65 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 1e-51 | 65 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 1e-55 | 63 |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 5e-48 | 56 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 4e-34 | 47 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 6e-34 | 47 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 6e-34 | 47 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 4e-34 | 47 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 4e-34 | 47 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 4e-34 | 47 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 5e-36 | 46 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 2e-33 | 46 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 5e-34 | 46 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 5e-34 | 46 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 7e-34 | 46 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 7e-34 | 46 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 7e-34 | 46 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 8e-31 | 45 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-29 | 44 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-30 | 44 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-30 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG1012 | Protein | 2e-55 | 66 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG0551 | Protein | 6e-52 | 65 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG1773 | Protein | 2e-55 | 63 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG2455 | Protein | 6e-54 | 62 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG0715 | Protein | 1e-33 | 46 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG0827 | Protein | 2e-34 | 46 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG0188 | Protein | 3e-34 | 45 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG0394 | Protein | 5e-35 | 45 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG0044 | Protein | 7e-28 | 42 |
| spaP | YP_007030625.1 | surface presentation of antigens protein | VFG1259 | Protein | 1e-24 | 42 |
