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Name : spaR (PputUW4_03626) Accession : YP_007030623.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein Function : - COG functional category : - COG ID : - EC number : - Position : 4213190 - 4213996 bp Length : 807 bp Strand : - Note : [U] COG4791 Type III secretory pathway, component EscT DNA sequence : ATGTCGGTGACGCTGTTTTTCGACCTGTACACCTGGCTTGCCGCCGCCCTCCTGGGGTTTGCACGCCTGGCGCCGATTTT TTTCATGTTGCCGTTCCTCAACAGTGGGGTGCTCACGGGCGCGCCACGCCAGGCTGTCATTGTGTTGGTGGCGTTGGGTT TCCAGGCTTATGTGGGGGTGCCGCTGCCGGACCTCGACGGGTTGGCATTCTTCGGTCTGATGTTGCGCGAGGCCGGCATT GGCGTGCTGCTTGGATGCCTGCTGTGCTGGCCGTTCTGGGTGCTGCACGCCATGGGCAATCTGATCGACAACCAGCGCGG GGCGATGCTCAGCAGCACCGTGGACCCGGCCAACGGCGTCGATACGTCGGAGCTGGCCAATTTTCTCCAGCTGTTTGCCG CGGTGGTTTATCTCGAGGGCGGCGGCATGCTGCTGATGCTTGAAACCGTTGGCCACAGTTACCGCCTATGCGCGCCGGTC AATGGCTGCGAGGTACACCTGACATCGATTCTGAGCCTGCTCGACGCGCTGGTGAGCAAGACCCTGGTGATCAGCGCGCC GGTGGTGGCCACGCTGTTGATCAGCGAAGCGCTGCTTGGCTTGCTCTCGCGGTATGCGCCGCAAATGAATGCTTTCTCGG TGTCGCTGACGGTCAAGAGCCTGGTGGCGCTGGTAGTGTTGATGCTGTATTTCGGCGTACACCTGCCGGACGAAGTCCTG CGCATGGGCATGAAATCCCAAGGGCTGGAACATTATCTGGGCCGCGAAGGGGAGGCTACCGATGTCGTCCAGCGCCTCGA AGACTGA Protein sequence : MSVTLFFDLYTWLAAALLGFARLAPIFFMLPFLNSGVLTGAPRQAVIVLVALGFQAYVGVPLPDLDGLAFFGLMLREAGI GVLLGCLLCWPFWVLHAMGNLIDNQRGAMLSSTVDPANGVDTSELANFLQLFAAVVYLEGGGMLLMLETVGHSYRLCAPV NGCEVHLTSILSLLDALVSKTLVISAPVVATLLISEALLGLLSRYAPQMNAFSVSLTVKSLVALVVLMLYFGVHLPDEVL RMGMKSQGLEHYLGREGEATDVVQRLED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-47 | 56 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-47 | 56 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 2e-48 | 56 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-46 | 55 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 2e-31 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaR | YP_007030623.1 | surface presentation of antigens protein | VFG0549 | Protein | 8e-49 | 56 |
| spaR | YP_007030623.1 | surface presentation of antigens protein | VFG1014 | Protein | 3e-33 | 50 |
| spaR | YP_007030623.1 | surface presentation of antigens protein | VFG2453 | Protein | 2e-27 | 44 |
| spaR | YP_007030623.1 | surface presentation of antigens protein | VFG1771 | Protein | 2e-21 | 41 |
