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Name : spaS (PputUW4_03625) Accession : YP_007030622.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein Function : - COG functional category : - COG ID : - EC number : - Position : 4212181 - 4213215 bp Length : 1035 bp Strand : - Note : [NU] COG1377 Flagellar biosynthesis pathway, component FlhB DNA sequence : ATGTCGTCCAGCGCCTCGAAGACTGAGAAACCCACCGCCAAGCGCCTGCGCGATGCGTCACGCAAAGGGCAGACGTTCAA GGCCAAGGATCTGGTGATCACCTGCCTGACCCTCTGCGGCATCACCTACATGGTGTTCAACAGCTCGCTGGTGGAGGTCA TGGAAGTCTATCGACGCATCATTGCCAGTGACTTTGACGTGGACCTGCAAGAGTACTCGGCCATGCTGGTGCTGGTCGGG CTCAAGGCATTGTTGCCATTGCTGCTGGTCTGTGTGTTGACCAGCGCATTGCCTGCACTGTTGCAAAGCGGTTTTGCCCT GGCCAGCGAAGCCTTGAAGCTCAACCTGGGAGCGTTGAACCCGATCAATGGCTTCAAAAAACTGTTCAGCATGCGCACCG TCAAGGACACGGTCAAAGCGCTGCTGTACCTGGGCAGTTTTGCCCTGGCCCTGTGGATTGTCTGGATCACCCAGCGGCAA CTGCTGTTTGCCCAACTGTTCGCCCAAGCCTCTGACCTGTTCGCAATCTGGGGCCACTTGTTGCTGGTGCTGGTGCTGGC GTTCCTCGGATGCGTGCTGCTGATCGTCGTGCTCGATGCGTTGAGCGAATACTGGCTGTTCATGAAGGATCAGATGATGG ACAAGGATTCGGTCAAGCGCGAACACAAGGAACAAGATGGCAATCCCGAGATCAAGGGACGCCGTCGTGATCTGCATCGT GAGTTGCTGTCAGAGCAAATCAAATCCGATGTGCGCAACTCGCGGATGATCATCGCCAACCCGACGCACATTGCCATCGG TGTGTATTTCCGCCCGGAAATCACCGTGTTGCCGTTTATCTCCCTGATGGAAACCAACCAGCGCGCCCTGGCCGTTCGCG CCTATGCCAAAGAGGTCGGTGTGCCGGTGATCAATGACATCGCATTGGCCCGGCGGATATTCAAAACCCACCAGCGCTAC AGCTTTCTTCAAGTACAGGAAATCGAAGAAGTCCTGCGTCTGTTGATCTGGCTCGAACAGGTCGAGCAGGCCTGA Protein sequence : MSSSASKTEKPTAKRLRDASRKGQTFKAKDLVITCLTLCGITYMVFNSSLVEVMEVYRRIIASDFDVDLQEYSAMLVLVG LKALLPLLLVCVLTSALPALLQSGFALASEALKLNLGALNPINGFKKLFSMRTVKDTVKALLYLGSFALALWIVWITQRQ LLFAQLFAQASDLFAIWGHLLLVLVLAFLGCVLLIVVLDALSEYWLFMKDQMMDKDSVKREHKEQDGNPEIKGRRRDLHR ELLSEQIKSDVRNSRMIIANPTHIAIGVYFRPEITVLPFISLMETNQRALAVRAYAKEVGVPVINDIALARRIFKTHQRY SFLQVQEIEEVLRLLIWLEQVEQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-82 | 60 |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-82 | 60 |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-81 | 60 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-82 | 60 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 4e-79 | 55 |
| ECs3721 | NP_311748.1 | surface presentation of antigens protein SpaS | Not tested | LIM | Protein | 9e-64 | 49 |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 2e-54 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaS | YP_007030622.1 | surface presentation of antigens protein | VFG0548 | Protein | 7e-83 | 60 |
| spaS | YP_007030622.1 | surface presentation of antigens protein | VFG1015 | Protein | 1e-66 | 49 |
| spaS | YP_007030622.1 | surface presentation of antigens protein | VFG2452 | Protein | 4e-56 | 46 |
| spaS | YP_007030622.1 | surface presentation of antigens protein | VFG1770 | Protein | 6e-46 | 42 |
