Gene Information

Name : iagB (PputUW4_03618)
Accession : YP_007030615.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : cell invasion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4204847 - 4205299 bp
Length : 453 bp
Strand : -
Note : [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence :
ATGACACAGCGCGGACTCAAGTGGCTAACGGTGCTGGTGTGCCTTGGCGCGGGTCAGGCGCAAGCCTGGTGCTGGAATGA
GGCGGGGGCGCGACATGCGATCGAACCCGAACTGCTCCGAGCGATTGCCGATGTCGAATCGGGACAGAATCCGAACGCAA
TGAACTACAACAAGGATGGTTCGCGAGACATCGGGTTAATGCAGATCAACAGCCATCATCTCCCCCGGTTGAGTGCCCAG
GGCATCACTGAGCAGCGACTGTTGGGTGATCCTTGCCTGTCGGTTGAAGTCGGTGCGTCGGTGCTTGCCGATTTTATCGC
GCGTTACGGCTACAACTGGACGGCAGTGGGTGCCTACAACGCCGGTCATTCACCCGACCGGCAAGCCGCGCGCCTGCGCT
ATGCACGCAAGGTCTGGCAGCGTTATCAGGTGTTTTCCCTGGCTCGACAATGA

Protein sequence :
MTQRGLKWLTVLVCLGAGQAQAWCWNEAGARHAIEPELLRAIADVESGQNPNAMNYNKDGSRDIGLMQINSHHLPRLSAQ
GITEQRLLGDPCLSVEVGASVLADFIARYGYNWTAVGAYNAGHSPDRQAARLRYARKVWQRYQVFSLARQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 4e-29 57
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 4e-29 57
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 6e-29 56
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 6e-29 56
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 2e-16 42
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 1e-14 42
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 1e-14 42
unnamed AAC31524.1 L0045 Not tested LEE Protein 9e-15 42
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 9e-15 42
unnamed AAK26704.1 unknown Not tested LEE Protein 2e-15 42
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 3e-15 42
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 3e-15 42
unnamed AAL57531.1 unknown Not tested LEE Protein 2e-15 42
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 2e-15 42
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 2e-15 42
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 2e-14 41
pilT AAC98888.1 PilT Virulence SPI-7 Protein 3e-19 41
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 5e-19 41
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 5e-19 41
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 2e-14 41
unnamed AAL06358.1 unknown Not tested LEE Protein 6e-15 41
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 2e-14 41
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 2e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iagB YP_007030615.1 cell invasion protein VFG0539 Protein 1e-29 57
iagB YP_007030615.1 cell invasion protein VFG0994 Protein 2e-27 46
iagB YP_007030615.1 cell invasion protein VFG0823 Protein 4e-15 42
iagB YP_007030615.1 cell invasion protein VFG0719 Protein 7e-15 41