Gene Information

Name : prgI (PputUW4_03616)
Accession : YP_007030613.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : type III secretion cytoplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4203274 - 4203534 bp
Length : 261 bp
Strand : -
Note : -

DNA sequence :
ATGGCCGACATCGGTATCCCCATCGACTTTTCCGATGACTTTCTCGGGCGTCAGGCCCAGGCATTCGAAGACGGTGCATC
CAAACTCAAGGACAAGCTGGACGAAGCGCTGAAAGAATTGGAGGGCAATGTATCGGACCCTGGCAAGTTGGCCGCTTATC
AGACCGCGTTTTCATCCTACACAGTGTTTCGAAACGCCCAGACCAACACCATCAAGGGCTTCAAGGATATCGACATGGCG
ATCATCCAGGCAGCTCGCTGA

Protein sequence :
MADIGIPIDFSDDFLGRQAQAFEDGASKLKDKLDEALKELEGNVSDPGKLAAYQTAFSSYTVFRNAQTNTIKGFKDIDMA
IIQAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 5e-08 48
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 7e-08 48
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 7e-08 48
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 5e-08 46
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 5e-08 46
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 6e-07 44
ECs3718 NP_311745.1 EprI Not tested LIM Protein 2e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prgI YP_007030613.1 type III secretion cytoplasmic protein VFG0535 Protein 2e-08 48
prgI YP_007030613.1 type III secretion cytoplasmic protein VFG0996 Protein 9e-08 48
prgI YP_007030613.1 type III secretion cytoplasmic protein VFG2466 Protein 9e-07 43