|
Name : prgK (PputUW4_03614) Accession : YP_007030611.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 4202186 - 4202908 bp Length : 723 bp Strand : - Note : [U] COG4669 Type III secretory pathway, lipoprotein EscJ DNA sequence : ATGAAGCCTGGCGTGTTGCTGATACTGTTGTGCCTGGCGCTTTCGGGGTGTCGCCAACCCAATCTGCTTGAAGGGCTGGA TCAACAGCAGGCCAATGAAGTGCTTTCGGTGTTGCAGCGCAACAATATAGCTGCGGTGAAAGTCGATGCCGGCAAAACCG GCTATGCGGTGAAAATCGATCAGGTCGATTTTTCCGCGGCCGTCGATTTGCTCAACCTCTATTCCTTGCCTTCGCGGCCG CGCCTGCAAGTGGCAGAGATGTTTCCTGCCGACTCGCTGGTGGCCTCGCCCCGCGCTGAAAAGGCCCGGCTTTATTCGGC GCTGGAGCAGCGAATCGAACAGTCGCTGGGGGTGCTCGAAGGCGTGGTGTCGGCGCGAGTGCATGTCAGTTATGACCTGG AGGCCGGCGAAGGCGGACGCAAGGCGCCGCCTGTCCACCTCTCGGCAGTGGCGATCCATGAGCTCGACGTCGACCCGCAA TTGCTGATCACCGACATCAAGCGATTTCTCAAGAACAGTTTTGCGGCGGTCGAGTACGAGAACATCTCGGTGGTACTGTC CAAGCGTTCCCCGACCCAGCATGTCGCGCCGTCCGTGGCTGCAACGCAAGGGCATTCGCACTGGGTCTGGTGGTTGGCCG CGGTGACCGCATTGCTGGTGGCCAGTGGCGCAGCCTGGGCTTACCGCCAATCAAGCGCAGGTCAGCATGATGTCGCACGC TGA Protein sequence : MKPGVLLILLCLALSGCRQPNLLEGLDQQQANEVLSVLQRNNIAAVKVDAGKTGYAVKIDQVDFSAAVDLLNLYSLPSRP RLQVAEMFPADSLVASPRAEKARLYSALEQRIEQSLGVLEGVVSARVHVSYDLEAGEGGRKAPPVHLSAVAIHELDVDPQ LLITDIKRFLKNSFAAVEYENISVVLSKRSPTQHVAPSVAATQGHSHWVWWLAAVTALLVASGAAWAYRQSSAGQHDVAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prgK | AAS66872.1 | PrgK | Virulence | SSR-2 | Protein | 5e-58 | 68 |
| prgK | YP_217790.1 | cell invasion protein | Virulence | SPI-1 | Protein | 3e-53 | 60 |
| prgK | NP_461792.1 | needle complex inner membrane lipoprotein | Virulence | SPI-1 | Protein | 3e-53 | 60 |
| prgK | NP_457265.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 2e-53 | 60 |
| prgK | NP_806474.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 2e-53 | 60 |
| ECs3716 | NP_311743.1 | EprK | Not tested | LIM | Protein | 3e-55 | 58 |
| eprK | AAZ31284.1 | EprK | Virulence | ETT2 | Protein | 2e-53 | 57 |
| ysaJ | AAS66833.1 | YsaJ | Not tested | SSR-1 | Protein | 1e-32 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| prgK | YP_007030611.1 | type III secretion apparatus lipoprotein | VFG0533 | Protein | 1e-53 | 60 |
| prgK | YP_007030611.1 | type III secretion apparatus lipoprotein | VFG0998 | Protein | 2e-45 | 54 |
| prgK | YP_007030611.1 | type III secretion apparatus lipoprotein | VFG1787 | Protein | 8e-37 | 48 |
