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Name : aer (PputUW4_03556) Accession : YP_007030553.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : aerotaxis receptor Function : - COG functional category : - COG ID : - EC number : - Position : 4133508 - 4135073 bp Length : 1566 bp Strand : + Note : [NT] COG0840 Methyl-accepting chemotaxis protein DNA sequence : ATGCGTAACAACCAGCCTATTACACAACGCGAACGGACCTTTCCCGCTCAGCAACGGTTGATTTCCACCACCGATGCCAA GGGCATGATCACCTACTGCAACGACGCCTTTGTCGAAATCAGCGGGTTCTCCCGAGAGGAGCTGATCCGTGCACCGCACA ACCTGGTCCGTCACCCCGACGTCCCGGCCGCGGTGTTCGCCCACATGTGGGGCACGCTGAAACAAGGCTTGCCATGGATG GGCATTGTGAAGAATCGCTGCAAGAGCGGTGATCACTACTGGGTTAACGCCTATGTGACACCGATCTTCGAAGGCAATCA GGTGACCGGTTACGAGTCGGTGCGGGTCAAGCCCACCGCCGAACAGATCCGCCGTGCCGAAGCGCTCTACCAACGCATCA ACCAGGGCAAGTCAGCCATTCCCTCTTCGGATAAATGGTTGCCGATCCTGCAGGACTGGCTGCCGTTCATTCTGGTCAGC CAGTTGAGCTTCATGATCGGTGCATCGCTGAACTCCCATTGGGGTTTTGCCCTGGCCGCCGGTCTCTCGGTGCCGCTGGG CCTGATGGGCCTGCAGTGGCAACAGCGCGGTCTCAAGCGTTTGCTGCGCCTGGCCGAGCAGACCACCTCCGATCCGTTGA TCGCACAGATGTACACCGACAGTCGCGGCGCCCAGGCGCGGCTGGAGATGTCCATCCTCAGCCAGGAAGCACGCTTGAAA ACCTGTCTGACTCGACTGCAAGATACGGCCGAGCACTTGACCGATCAGGCCAGACAGTCCGATGACCTGGCGCACAACAG CTCCAGCGGCCTGGAACGTCAACGGGTCGAGACCGAGCAAGTGGCCACGGCGGTCAACCAAATGGCCGCGACCACCCAGG AAGTCGCCAGCCACGTACAACGCACCGCCGACGCCACCCAGGAAGCCAATCGGCTGACCGGTCGCGGTCGTGACATCGCC GGGGAAACCCGCGAAGCCATCCAGCGCCTGTCGGTGGTGGTGGGTGAAACCGGCGTCACCGTGACCCAGCTGGCCAAGGA CAGCAACGAAATCGGCGGCGTGGTCGACGTGATCAAAGGCATCGCCGACCAGACCAACCTGCTGGCCCTGAACGCCGCCA TCGAAGCGGCCCGTGCCGGTGAGATGGGTCGTGGTTTTGCGGTGGTGGCCGACGAAGTCCGTCAGCTGGCGCAACGCACC AGCGAGTCCACCGGGCAGATTCATGCGCTTATCGCCAAGCTCCAGCAAACCGCCGGTACTGCGGTGCAAACCATGGAAGC CGGGCATCGTCAGGCCGAAGAAGGCGTGGCGCGGGTGCTGGAAGCGGATCAGGCACTGGTGGGGATCAGTGAAGCGGTGG CCAACATCACCGACATGACCACCCAGATCGCCGCCGCGACCGAAGAGCAAAGTGCCGTGGCCGAAGAAATCAGCCGCAAC ATCAGCAACATCTCGGAGCTGGCGGACCAGACCTCGGAACAGGCGCAGAACTCGGCGTTGTTGAGTGAAGAGCTGACCAA GACTGCGAATACCCAGTATTCGTTGGTGGAGCGGTTCAACCGCTGA Protein sequence : MRNNQPITQRERTFPAQQRLISTTDAKGMITYCNDAFVEISGFSREELIRAPHNLVRHPDVPAAVFAHMWGTLKQGLPWM GIVKNRCKSGDHYWVNAYVTPIFEGNQVTGYESVRVKPTAEQIRRAEALYQRINQGKSAIPSSDKWLPILQDWLPFILVS QLSFMIGASLNSHWGFALAAGLSVPLGLMGLQWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQEARLK TCLTRLQDTAEHLTDQARQSDDLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIA GETREAIQRLSVVVGETGVTVTQLAKDSNEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT SESTGQIHALIAKLQQTAGTAVQTMEAGHRQAEEGVARVLEADQALVGISEAVANITDMTTQIAAATEEQSAVAEEISRN ISNISELADQTSEQAQNSALLSEELTKTANTQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 3e-72 | 41 |
