Gene Information

Name : lolD (PputUW4_03503)
Accession : YP_007030501.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 4066993 - 4067691 bp
Length : 699 bp
Strand : -
Note : [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAGTGAGTCGGGCATGAGTGATAAAGCAATTTTGAGCTGCCGCAACCTGGGCAAATCCTACGAGGAAGGTCCGGAGTC
GGTAGAGGTCCTGGCCGGGCTGCAACTGGAAATGCATCCGGGCGAGCGTGTGGCGATTGTCGGCAAGTCGGGCTCGGGCA
AAAGCACCTTGCTCAACCTGTTGGGCGGCCTCGATACGCCGACCAAGGGCAGCGTCTGGCTCGATGGCGAAGAACTGTCG
GCGCTGAGCGAGAAGAAACGCGGCCTGCTGCGTAACCGGGCCCTGGGCTTCGTGTACCAGTTCCACCACCTGCTGCCGGA
ATTCACGGCGCTGGAAAACGTCTGCATGCCGCTGCTGATCGGCAAGACCGCGATCCCCGAAGCGCGCCAGCGTGCCACGG
CGCTGCTGGAGCGGGTAGGGCTGGGCCACCGGCTGGAACACAAACCGGCTGAATTGTCCGGTGGTGAGCGTCAGCGCGTG
GCTATCGCCCGCGCCCTGGTCAACACACCGGGCCTGGTGATGCTCGACGAGCCGACCGGCAACCTCGACGCCCACACCGC
CCAGGGCATTCAGGACTTGATGCTGGAACTCAGCACCTCGATGCGCACGGCGTTCCTGGTGGTGACCCACGACATGAACC
TGGCCCGCCAGATGGACCGAGTCCTGCACCTGCAGGAAGGTTGCCTCACACCCATCTGA

Protein sequence : 
MSESGMSDKAILSCRNLGKSYEEGPESVEVLAGLQLEMHPGERVAIVGKSGSGKSTLLNLLGGLDTPTKGSVWLDGEELS
ALSEKKRGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGKTAIPEARQRATALLERVGLGHRLEHKPAELSGGERQRV
AIARALVNTPGLVMLDEPTGNLDAHTAQGIQDLMLELSTSMRTAFLVVTHDMNLARQMDRVLHLQEGCLTPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_007030501.1 lipoprotein releasing system ATP-binding protein NC_012469.1.7686878. Protein 1e-39 43
lolD YP_007030501.1 lipoprotein releasing system ATP-binding protein NC_008702.1.4606598. Protein 2e-32 43