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Name : gspE (PputUW4_03290) Accession : YP_007030290.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3837267 - 3838973 bp Length : 1707 bp Strand : - Note : [NU] COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGGACCGTCTATCCCTTGCCGTAGAACCGGCGCAAGTGGAAGGTGTACCGACTCGTTTCACCAGTGAACAACTGGCCCA GGCCCGCGCCCTGGCCACCAGTTCCGGCGAGCGGATGCTGGACACCCTCGGGGAGTTGAGTGAACTGGCTCCCATGCCTT TCATCCAGTGCCTGGGTGTAACCCTGCACTATCCGGTGCTCGACACCGACAGCCTGTTCAGTGCCACCCCGGTGTTCGAC CGGGTGACCCTGGCCCAATGCATCAAGCGAGAATTCATCCTGCTGCGTCACGACGATGCGGTCATCGGCGTGTTCGCCGA CCCCTTCGACAGCGCACGCCTGGCCTGGATCGACGAATGCCTGCATGGCGCACCGCTGTACCTGGTGCATGCCGACGACC TGAAGGCCTACCTGGCGCGTCACGAAGAAAGTTTCCACGCGGTGGAGTCGCTCAACGCCCATGCCGAGGGCGCAACCGAG ATCGACACCCTGCAAAGCCTGTCCCTGACCAGCATCAGCGAAGACGCCAGCGTGGTGGTCAAGCTGGTCAACTCGACGCT GTACGACGCGCTGAAAATGCACGCCAGCGACATCCACCTCGGCACCACCGGCAGCGGCCTGGTGATCAAGTACCGGATCG ACGGTGTGCTCAACAACATCAGCAAGATCCAGGGCAGCGAGTTCGCCGAGCAAGTGATTTCCCGGGTCAAGGTCATGGCT GAACTGGACATCGGCGAAAAGCGCGTGCCCCAGGACGGTCGTTTCAAGATCGGCATCAGCGGCCGGCAGATCGACTTCCG GGTGTCGATCATGCCGAGCATCTTCGGCGAAGACGCGGTGCTGCGGGTGCTCGACAAACAGGACCTCGCCGACAAAGTCA GTGGCGTACAACTGCAAGCCCTGGGCTTTGAAGAAGATACCCTGCGCCAGTTGCGCCGGCTGGCCGCCGAACCTTACGGC ATGGTGCTGGTGACCGGGCCTACCGGTAGCGGCAAGACCACCACCCTGTACGCGATGATCACCGAGATCAATCACGGTGT GGACAAGATCATCACCATTGAAGACCCGGTGGAATATCAACTGCCGGGCGTACTGCAAATCCCCGTCAACGAGAAAAAGG GCCTGACCTTCGCCCGGGGCCTGCGCTCGATCCTGCGTCATGACCCGGACAAGATCATGGTCGGTGAAATCCGCGACCCG GACACCGCACAGATCGCCGTGCAATCGGCGCTCACCGGTCACCTGGTGTTCACCACCATCCACGCCAACAACGTGTTCGA CGTGATCGGCCGGTTCACCCAGATGGAAATCGATCCCTACAGCCTGGTCTCGGCGCTCAATGCCGTACTGGCCCAGCGTT TGATCCGCCTGGTCTGCACCAGTTGCAGCGCCCCTTACAGCCCGACAGAAGAAGAGCTGGAGGTCTCGGGGCTCGATCCG CAAAAGGTCGCTCACTACCGGTTCGTCCACGGCAAGGGTTGCGGGCATTGCCGGGGCACCGGGTATCGCGGGCGCAGTGC AATTGCCGAGTTGCTGCACCTGGATGACGAACTGCGGCAAATGATCGTCGAGCGCCAGCCCATCTCGAAAATCAAGGCCC ATGCCTGCAAACGTGGCTTGCGCCTGTTGCGCGAGTCGGCGCTGGAGATGGTGGAACAAGGCCGGACCACTCTCGAGGAG ATCAATCGTGTCACTTTTATCTCGTGA Protein sequence : MDRLSLAVEPAQVEGVPTRFTSEQLAQARALATSSGERMLDTLGELSELAPMPFIQCLGVTLHYPVLDTDSLFSATPVFD RVTLAQCIKREFILLRHDDAVIGVFADPFDSARLAWIDECLHGAPLYLVHADDLKAYLARHEESFHAVESLNAHAEGATE IDTLQSLSLTSISEDASVVVKLVNSTLYDALKMHASDIHLGTTGSGLVIKYRIDGVLNNISKIQGSEFAEQVISRVKVMA ELDIGEKRVPQDGRFKIGISGRQIDFRVSIMPSIFGEDAVLRVLDKQDLADKVSGVQLQALGFEEDTLRQLRRLAAEPYG MVLVTGPTGSGKTTTLYAMITEINHGVDKIITIEDPVEYQLPGVLQIPVNEKKGLTFARGLRSILRHDPDKIMVGEIRDP DTAQIAVQSALTGHLVFTTIHANNVFDVIGRFTQMEIDPYSLVSALNAVLAQRLIRLVCTSCSAPYSPTEEELEVSGLDP QKVAHYRFVHGKGCGHCRGTGYRGRSAIAELLHLDDELRQMIVERQPISKIKAHACKRGLRLLRESALEMVEQGRTTLEE INRVTFIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-81 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-81 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_007030290.1 | type II secretion system protein E | VFG2048 | Protein | 1e-81 | 46 |
