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Name : gabD2 (PputUW4_03199) Accession : YP_007030199.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3745797 - 3747248 bp Length : 1452 bp Strand : + Note : [C] COG1012 NAD-dependent aldehyde dehydrogenases DNA sequence : ATGAGCCCAGCAGCCTCGTTACTGTTCCGCCAGCAGGCCTACATCAATGGCCAATGGCTGGATGCACCCGATGGTGCGCA ACAGGACATCTTCAACCCGGCCACCGGCGAGTTGATCGGCCATGTGCCGAACCTCAGCGCCGAGCATGCGCGCCTGGCTA TCGAGGCCGCCAACAAGGCCTGGCCGGCCTGGCGCGCGCTGACCGCCAAGGAGCGCAGCAATACGCTCAAGCGCTGGCAT GCCCTGATGCTGGAAAATGCCGACGCCCTGGCACACATTCTCACCCTCGAACAAGGCAAGCCACTGGCCGAAGCCAAGGG TGAGATCCTCTACGCCGCGAGCTTCATCGAGTGGTTCGCCGAGGAAGCCAAGCGCATCTACGGCGACACCATTCCCAGCC ACAAGGGCGATGCGCGCATCGTGGTCAGCAAGGAGCCGATTGGTGTGGTCGCGGCCATCACGCCGTGGAACTTCCCGGCG GCGATGATCACCCGCAAGGCCGGCCCGGCGCTGGCCGCCGGCTGCCCGTGCATCGTCAAGCCGGCTCCGGAAACACCCTT CTCGGCACTGGCCATGGCTGCACTGGCGGAACAGGCCGGCATTCCAGCGGGTATTTTCAACGTGATCACCGGCGACGCCA TCGCCATCGGCGCCGAGCTGACCGCCAGTGCGCAGGTGCGCAAATTGTCGTTCACCGGCTCCACCGCCATCGGCAAACTG CTGATGGCCCAGTGCGCGCCGACGCTGAAAAAAGTCTCGCTGGAGCTGGGCGGCAACGCGCCATTCATTGTCTTCGACGA CGCCGATCTGGAGCGCGCAGTCGACGGTGCGCTGATCGCCAAATTCCGCAACGCCGGGCAGACCTGCGTCTGCGTCAATC GCTTCCTGGTGCAGGCCGGCATCCACGATGCCTTTGTCGCTCGACTGGCCGAACGGGTTTCGCAGCTCAAGGTCGGCAGC GGTTTCGAAGAAGGTGTGACCCAGGGCCCGCTGATCAACGAGCGCGCCGTGGCCAAGGTCGAAGAGCACGTGCAAGACGC CCTGGCCCAGGGTGCACGCCTGCTGTGCGGCGGCGAACGCCATGCGCTGGGCAACGGTTTCTTCCAGCCGACCGTGGTCA CAGGCGTCACCCCACAGATGAAAGTCGCCCGCGATGAAACCTTCGGTCCGCTGGCCGCGGTGTTCCGTTTCGACACCGAG GCCCAGGCCATCGAGATGGCCAACGACACCGAATTCGGCCTCGCCGCCTACTGCTACACCCGCGACCTGGGCCGCGCCTG GCGCATGAGCGAGGCGTTGGAGTACGGCATGGTCGGGATCAACGAAGGGCTGATTTCCACCGAAGTCGCACCGTTTGGCG GCATCAAGTCCTCGGGGCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAGGATTACCTGGAACTCAAATACACCTTGATG GGCGGCCTTTGA Protein sequence : MSPAASLLFRQQAYINGQWLDAPDGAQQDIFNPATGELIGHVPNLSAEHARLAIEAANKAWPAWRALTAKERSNTLKRWH ALMLENADALAHILTLEQGKPLAEAKGEILYAASFIEWFAEEAKRIYGDTIPSHKGDARIVVSKEPIGVVAAITPWNFPA AMITRKAGPALAAGCPCIVKPAPETPFSALAMAALAEQAGIPAGIFNVITGDAIAIGAELTASAQVRKLSFTGSTAIGKL LMAQCAPTLKKVSLELGGNAPFIVFDDADLERAVDGALIAKFRNAGQTCVCVNRFLVQAGIHDAFVARLAERVSQLKVGS GFEEGVTQGPLINERAVAKVEEHVQDALAQGARLLCGGERHALGNGFFQPTVVTGVTPQMKVARDETFGPLAAVFRFDTE AQAIEMANDTEFGLAAYCYTRDLGRAWRMSEALEYGMVGINEGLISTEVAPFGGIKSSGLGREGSKYGIEDYLELKYTLM GGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-147 | 68 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-83 | 41 |
