Gene Information

Name : PputUW4_03162 (PputUW4_03162)
Accession : YP_007030162.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.1
Position : 3705567 - 3706745 bp
Length : 1179 bp
Strand : +
Note : [E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAGTCAACAGGACAAAAACGCCCCGCCTCAAGGCTTCGCCACCCGGGTGATCCATGCCGGGCAAACGCCGGACCCATC
CACCGGGGCCTTGATGCCGCCGATCTACGCCAACTCCACCTACCTGCAACAGAGCCCCGGGGTACACAAAGGCCTCGACT
ACGGGCGCTCGCACAACCCGACGCGCTGGGCCCTGGAGCGGTGCGTGGCCGACCTCGAAGGCGGCACCCGGGGCTTTGCC
TTCGCCTCGGGGCTGGCGACCATTTCCACGGTGCTCGAACTGCTCGATGCCGGTTCGCACGTCGTCTCCGGCAACGACCT
GTACGGCGGCACCTTCCGCCTGTTCGACAAGGTGCGCCAGCGCAGCGCCGGGCACCGCTTCAGCTTCGTCGACCTGACCG
ACCTGGCGGCGTTCGAGGCGTCCCTGCAGGACGACACCCGCATGGTCATGGTCGAGACCCCGAGCAATCCGTTGCTGCGC
CTCACCGACCTCGCCGCCATCGCCCGCACCTGCCGCGCGCGCGGCATCATCTGCGTGGCCGACAACACCTTCGCCAGCCC
GTGGATCCAGCGCCCGCTGGAACTGGGTTTCGACATCGTGCTGCACTCGACCACCAAATACCTCAACGGCCACTCCGACG
TGATCGGCGGCATCGCCGTGGTCGGGCAGAACGCCGAACTGGCCGAGCGCCTGGGCTTTTTGCAAAACGCCGTCGGCGCC
ATCGCCGGCCCGTTCGACGCCTTCCTCACCCTGCGCGGGGTGAAGACCCTGGCCCTGCGCATGGAACGCCATTGCAGCAA
CGCACTGGAACTGGCGCAGTGGCTGGAACGCCAGCCGCAAGTCTCACGGGTCTACTACCCCGGCCTGCCCTCGCACCCGC
AGCACGAACTGGCCCAGCGGCAAATGCGCGGATTCGGCGGGATGATCTCCCTCGACCTCAACAGCGACCTGGCCGGCGCC
AAACGCTTCCTCGAGAACGTACAGATCTTCGCCCTGGCCGAGAGCCTGGGCGGCGTGGAAAGCCTGATCGAACACCCGGC
GATCATGACCCACGCCACCATCCCGCCCGATACCCGCGCAGAGTTGGGGATTGGCGATGGGCTGGTGCGGTTGTCGGTGG
GGGTTGAGGATGTGGAGGACTTGCGCGCGGATCTGGCGCAAGCGTTGGCGCGGATGTGA

Protein sequence :
MSQQDKNAPPQGFATRVIHAGQTPDPSTGALMPPIYANSTYLQQSPGVHKGLDYGRSHNPTRWALERCVADLEGGTRGFA
FASGLATISTVLELLDAGSHVVSGNDLYGGTFRLFDKVRQRSAGHRFSFVDLTDLAAFEASLQDDTRMVMVETPSNPLLR
LTDLAAIARTCRARGIICVADNTFASPWIQRPLELGFDIVLHSTTKYLNGHSDVIGGIAVVGQNAELAERLGFLQNAVGA
IAGPFDAFLTLRGVKTLALRMERHCSNALELAQWLERQPQVSRVYYPGLPSHPQHELAQRQMRGFGGMISLDLNSDLAGA
KRFLENVQIFALAESLGGVESLIEHPAIMTHATIPPDTRAELGIGDGLVRLSVGVEDVEDLRADLAQALARM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-81 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-82 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-57 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputUW4_03162 YP_007030162.1 cystathionine gamma-lyase BAC0207 Protein 5e-73 46