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Name : clpV (PputUW4_03084) Accession : YP_007030084.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : ClpV1 family type VI secretion ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 3624063 - 3626705 bp Length : 2643 bp Strand : - Note : [O] COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGTCCCATCATTCCACGCGCTTGCTTCGCCGCCTCAATCCTTACTGCGCCCAGGCGCTCAGCGCGGCGGCTTCGTTGTG TCAAAGCCGTGCCCATGGGCGGATCAGCATCGAACACTGGCTGCTCAAGTTGCTGGAGCAGGGCGAGGGCGATCTGACCC TCATTGCGCGTCGCCATGAGTGGGACATGGATGCACTTTGGCGCGGGTTGCTCGACCACCTCGACAGGCTGCCGCGCAGC GTGCAGGGCAAGCCGCAGTTGTGCGGCAAGTTGCAAAAGCTCATCGAGAACGCCTGGCTGCGTGCATCGCTGGAGGGTAA CGACAACCTGCGTTCGGCACACTTGCTTGGCGCATTGCTGGAGAGTCCGGACCTGCTGGCTTGCGAAGCGGCCTGGTCAA TACTGGACCTCAGCGAAACCCAGTTGCAGCAGTTGTTTGCCTTGCTCGACCAACACTCCGAGGAACGCCCGCACGTCCAA CAGCAAAGCGCGTTGGACCCGCTCCCGGCGACGCCGCTCGCCGACGGTGCCGGGCACGATGCCTTGCAAGCGGTACTGGA CATATTCACCCAGGACGTCACCGCCAAGGCGAGGGCAGGGCAGATCGACCCGGTGTTCGGGCGTGACGATGAAATCCGCC AGGTCATCGACATCCTCAGCCGGCGGCGCAAGAACAACCCGATCCTGGTCGGCGAGCCCGGCGTCGGCAAGACCGCGCTG GTCGAAGGCCTGGCCCTGCGCATTGCCGATGGCAACGTGCCCGACAGCCTCAAGGCAGTCAGCGTGCGCACCCTGGACCT TGGCCTGCTGCAAGCAGGCGCCGGGGTAAAAGGCGAATTCGAACAACGCCTGAAAAACGTCATCGACGCCGTGCAGCAGT CGGCCAACCCGGTGCTGCTGTTCATCGACGAGGCTCACACCCTGATCGGCGCCGGTAACCAGGCGGGCGGGGCGGATGCG GCGAATCTGCTCAAGCCGGCCCTCGCGCGAGGCGAATTGCGCACCATCGCCGCGACCACCTGGAGCGAATACAAACAGTA CTTCGAACGTGATGCTGCGCTGGAGCGGCGTTTCCAGGTGGTCAAGGTCGACGAGCCGGACGATGCCAGCGCCTGCCTGA TGCTGCGTGGCCTCAAGGCGCGTTACGCCAGCCATCACGGCGTGCACATTCAGGACGCGGCGGTGCAGGCCGCGGTCAGC CTGTCGCGGCGTTATCTCACCGGCCGCCAGCTGCCGGACAAGGCCGTCGACCTGCTCGACACCGCCAGCGCGCGGGTGCG CATGAGCCTCGACTGCGAGCCCCAGGCACTGGTGCGGCTCAAGGCCCGGCATGCCGCGCTGGAGCTGGAGCGGCGCGCAC TGGAACAGGATGTGCAACTCAATGGCAGCGACTTGAGCGAACGATTGACGCTGATCGCCGGGCAGCAGGTCGAGATGCAA CAACAGCAGGACGACTTGCTGTGCCAGTACCGCTATGAACTTGACCTGACCCGACAATTGCTCGATGCGCGTGAGGCCGA ACCGGCCCGCAGCGACCTCTGCGCGAAACTGCAGGAGCAATTGCTGCGGGCTCAGGGCAGCCAGCCAATGCTGTCCCTGG ACGTCGATGCACGCAGTGTTGCGGAAGTCATCGCCGACTGGACCGGCGTGCCCCTGGGCAGTTTGCTCAAGGACGAACAA GCCAGCCTGCTGACTCTGGAATGGCAACTCGGCGAGCGGGTGATTGGCCAGGAATCTGCCCTCGGTGCCTTGGCCCAGCG CCTGCGCGCAGCCAAGACCGGCTTGACCGAAGAGCAGGCGCCGTTGGGGGTATTCCTGTTGGTGGGCACCAGCGGCGTCG GCAAGACCGAAACCGCCCTGGCGCTGGCGGACTGCCTGTTCGGTGGCGAAAAATCCCTGATCACCCTCAACCTGTCCGAG TACCAGGAGGCCCACACCGTCAGCCAGCTCAAGGGCTCGCCACCGGGTTACGTAGGTTACGGCCAGGGCGGCGTGCTCAC CGAAGCGGTGCGCCAGCGGCCCTATAGCGTGGTGCTGCTGGATGAGGTGGAAAAGGCCCACCGCGACGTGCTCAACCTGT TCTACCAGGTGTTCGACCGCGGCTTCATGCGTGATGGCGAAGGACGCGAAATCGACTTCCGCAACACTGTCATCCTGATG ACCTCCAACCTCGGCAGCGATGAGCTGCAAAACGGTCTGCGCGAACAGCCCGAAGCCAGCGACAGCGACTTGCACGAATG GCTGCGACCGCTGCTGCGCGAGCACTTCCAGCCGGCGTTGCTCGCCCGCTTCCAGACCCTGATCTACCGCCCGCTGCTGG CCGACGCGCTCAAGCATATCGTCGCCCTGAAACTTGCCAAGGTCGCCAGTCGCCTGCACAGCCATTACGGCCTGGCCTGC GTGATTGAGGATGGCCTGCACGATGCATTGGTCGCCGCCTGCCTGCTGCCCGACACCGGTGCGCGCAACATCGACAGCCT GCTCAACCAGCAGATTCTGCCGGTCCTCAGTCAACAGTTGCTGCAGCGTCAGGCCGCCAAATACAAAACCCTTGGCGTAA CCCTGGGCTACAGCGATGAGGAGGGCATCACGCTGCAATTCACCGACGGACCTTCAGTCGTTGCACCTGAGGGCCGAGCA TGA Protein sequence : MSHHSTRLLRRLNPYCAQALSAAASLCQSRAHGRISIEHWLLKLLEQGEGDLTLIARRHEWDMDALWRGLLDHLDRLPRS VQGKPQLCGKLQKLIENAWLRASLEGNDNLRSAHLLGALLESPDLLACEAAWSILDLSETQLQQLFALLDQHSEERPHVQ QQSALDPLPATPLADGAGHDALQAVLDIFTQDVTAKARAGQIDPVFGRDDEIRQVIDILSRRRKNNPILVGEPGVGKTAL VEGLALRIADGNVPDSLKAVSVRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQSANPVLLFIDEAHTLIGAGNQAGGADA ANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQVVKVDEPDDASACLMLRGLKARYASHHGVHIQDAAVQAAVS LSRRYLTGRQLPDKAVDLLDTASARVRMSLDCEPQALVRLKARHAALELERRALEQDVQLNGSDLSERLTLIAGQQVEMQ QQQDDLLCQYRYELDLTRQLLDAREAEPARSDLCAKLQEQLLRAQGSQPMLSLDVDARSVAEVIADWTGVPLGSLLKDEQ ASLLTLEWQLGERVIGQESALGALAQRLRAAKTGLTEEQAPLGVFLLVGTSGVGKTETALALADCLFGGEKSLITLNLSE YQEAHTVSQLKGSPPGYVGYGQGGVLTEAVRQRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGREIDFRNTVILM TSNLGSDELQNGLREQPEASDSDLHEWLRPLLREHFQPALLARFQTLIYRPLLADALKHIVALKLAKVASRLHSHYGLAC VIEDGLHDALVAACLLPDTGARNIDSLLNQQILPVLSQQLLQRQAAKYKTLGVTLGYSDEEGITLQFTDGPSVVAPEGRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-129 | 44 |
