Gene Information

Name : glnA1 (PputUW4_00285)
Accession : YP_007027298.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 310044 - 311450 bp
Length : 1407 bp
Strand : -
Note : [E] COG0174 Glutamine synthetase

DNA sequence :
ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTCAAATGGATTGATCTGCGCTTCACGGACACCAAAGGCACTCA
GCACCACGTGACCATGCCGGCTCGCGATGCGCTGGATGACGACTTCTTCGAAGTCGGCAAAATGTTCGACGGTTCCTCCA
TCGCTGGCTGGAAAGGCATCGAAGCCTCCGACATGATCCTGATGCCGGACGACTCCACCGCCGTTCTGGATCCATTCACC
GAAGAACCGACCCTGATCCTGGTCTGCGACATCATCGAGCCTTCGAGCATGCAAGGCTACGACCGCGACCCACGTGCGAT
CGCCAAGCGCGCCGAAGAGCACCTGAAAGCCACCGGTATCGGTGACACCGTATTCGCAGGTCCAGAGCCAGAGTTCTTCA
TCTTTGACCAGGTGAAGTTCAAGTCCGACATTTCCGGCTCCATGTTCAAGATCTACTCCGAACAAGGTTCCTGGATGTCC
GACCAGGACATCGAAGGCGGCAACAAGGGTCACCGTCCAGGCGTCAAAGGCGGCTACTTCCCGGTTCCACCGTTCGACCA
CGACCACGAAATCCGTACCTCCATGTGCAACGCACTGGAAGAAATGGGCCTGACCGTCGAAGTTCACCACCACGAAGTGG
CAACTGCCGGCCAGAACGAAATCGGCGTCAAGTTCAACACCCTGGTGAAGAAAGCCGACGAAACCCAAACCCTGAAGTAC
GTCGTGCACAACGTTGCCGATGCCTACGGCCGCACCGCGACCTTCATGCCTAAGCCTCTGTACGGCGACAACGGCTCGGG
CATGCACGTGCACATGTCCATCTGGAAAGATGGCAAGAACACCTTCGCAGGCGAAGGCTATGCCGGCCTGTCGGACACCG
CCCTGTACTTCATCGGCGGCATCATCAAGCACGGTAAGGCCCTGAACGGCTTCACCAACCCGGCGACCAACTCCTACAAG
CGTCTGGTTCCAGGCTTCGAAGCGCCAGTGATGCTGGCCTACTCGGCTCGCAACCGTTCCGCTTCGATCCGCATTCCTTA
CGTGTCGAGCCCGAAAGCCCGCCGTATCGAAGCCCGCTTCCCGGATCCGGCTGCCAACCCGTACCTGTGCTTCGCCGCAC
TGTTGATGGCTGGCCTGGACGGCATCCAGAACAAGATCCACCCTGGCGACGCTGCTGACAAAAACCTGTACGACCTGCCG
CCTGAAGAGGCGAAAGAGATTCCACAAGTTTGCGGCAGCCTGAAAGAAGCCCTGGAAGAGCTGGACAAAGGTCGTGCGTT
CCTGACCAAAGGCGGCGTTTTCAGCGACGACTTCATCGACGCTTACATCGCCCTGAAAAGCGAAGAAGAAATCAAGGTAC
GTACCTTCGTACACCCACTGGAATACGAGCTGTACTACAGCTGCTGA

Protein sequence :
MSKSVQLIKDHDVKWIDLRFTDTKGTQHHVTMPARDALDDDFFEVGKMFDGSSIAGWKGIEASDMILMPDDSTAVLDPFT
EEPTLILVCDIIEPSSMQGYDRDPRAIAKRAEEHLKATGIGDTVFAGPEPEFFIFDQVKFKSDISGSMFKIYSEQGSWMS
DQDIEGGNKGHRPGVKGGYFPVPPFDHDHEIRTSMCNALEEMGLTVEVHHHEVATAGQNEIGVKFNTLVKKADETQTLKY
VVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSIWKDGKNTFAGEGYAGLSDTALYFIGGIIKHGKALNGFTNPATNSYK
RLVPGFEAPVMLAYSARNRSASIRIPYVSSPKARRIEARFPDPAANPYLCFAALLMAGLDGIQNKIHPGDAADKNLYDLP
PEEAKEIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAYIALKSEEEIKVRTFVHPLEYELYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-108 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA1 YP_007027298.1 glutamine synthetase, type I VFG1399 Protein 2e-103 49