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Name : PputUW4_02887 (PputUW4_02887) Accession : YP_007029887.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 3393389 - 3394999 bp Length : 1611 bp Strand : + Note : [R] COG4172 ABC-type uncharacterized transport system, duplicated ATPase component DNA sequence : ATGAATCAGGAAAATCTGATCGAAGTGCGCAACCTGTCCGTCGAATTTGTCGTCGGCAATCGTTGTCAGCGGGCCGTCGA AGGCGTCAGCTTCGACATCAGGCGCGGCGAAACCCTGGCCCTGGTCGGCGAGAGCGGTTCCGGTAAATCGGTGACCGCAC ACTCGATCCTGCGCCTGCTGCCCTACCCGCTCGCCCGCCATCCCTCCGGCACCATCGAGTATTCCGGGCAGAACCTGCTG GACCTGAAGGAAAAAACCATCCGCCACATCCGTGGCAACCGGATTGCAATGATCTTCCAGGAGCCGATGACCTCGCTCAA CCCGCTGCACTCGATCGAAAAGCAGATCAACGAGGTGCTGGGCATCCACAAGGGCCTGAGCGGCAAGGTCGCGACCAAAC GCACCCTGGAACTGCTGGAGATGGTCGGCATCCCCGAGCCACACAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCCGGC GGCCAGCGCCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAACTGCTGATCGCCGACGAGCCGACCACCGC GCTGGACGTGACCGTTCAGCTGAAAATCCTCGAATTGCTCAAGCAATTGCAGGCTCGTTTAGGCATGGCGCTGCTGCTGA TCAGCCACGATTTGAACCTTGTGCGAAGAATTGCGCATCGCGTATGTGTCATGCAGCAAGGTTGCATCGTCGAACAGGCA TCGTGCGAAGAATTGTTCCGTGCGCCGCAGCATCCGTACACTCGGGAACTGCTGGCAGCGGAGCCCGACGGCAAGCCCGC AAGCAACGTGATCGGTCCGCCCTTGCTGGCGGTCGAGGACCTGAAAGTCTGGTTTCCGATCAAGAAAGGCTTGCTCAAGC GCACGGTGGATTACGTCAAGGCGGTCGACGGCATCAACTTCAGCCTGCCCCAGGGCCAGACCCTTGGGATAGTGGGTGAA AGCGGTTCCGGTAAATCGACCCTGGGCCTGGCGATTTTGCGGCTGATCGCCAGCAAAGGCGCCATTCGCTTTGAAGGCCA GGCGCTGGACAGCCTGACGCAGCAACAGGTCCGGCCGCTGCGGCGGCAGATGCAAGTGGTGTTTCAGGACCCGTTCGGCA GCCTGAGCCCGCGGATGTGCGTGAGCCAGATCGTTGGCGAAGGCCTGCGGATCCACAGGATGGGCACCGAGGCGCAACAG GAACAAGCGATCATTGCAGCACTCAAGGAGGTAGGCCTGGATCCGGACACCCGGCACCGCTACCCCCACGAATTTTCCGG TGGGCAACGGCAGAGAATCGCCATTGCCCGGGCATTGGTGTTAAAACCGGCGTTGATTTTGCTGGACGAGCCGACTTCGG CGCTCGACCGCACGGTACAACGCCAGGTAGTTGAGCTTTTGCGTTCGCTGCAAACCAAGTACAACCTGACGTATCTGTTT ATCAGCCATGACCTGGCTGTGGTGAAAGCGCTGAGCCACCAGTTGATGGTGGTCAAGCATGGCCAAGTGGTCGAACAGGG AGACGCGCAAAGCATTTTTGCCGCCCCCCAACATCCGTATACACAGCAGTTGCTGGAAGCCGCTTTTTTGGCTCCGGCCA CTGCGCAATAA Protein sequence : MNQENLIEVRNLSVEFVVGNRCQRAVEGVSFDIRRGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGTIEYSGQNLL DLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGIHKGLSGKVATKRTLELLEMVGIPEPHKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKQLQARLGMALLLISHDLNLVRRIAHRVCVMQQGCIVEQA SCEELFRAPQHPYTRELLAAEPDGKPASNVIGPPLLAVEDLKVWFPIKKGLLKRTVDYVKAVDGINFSLPQGQTLGIVGE SGSGKSTLGLAILRLIASKGAIRFEGQALDSLTQQQVRPLRRQMQVVFQDPFGSLSPRMCVSQIVGEGLRIHRMGTEAQQ EQAIIAALKEVGLDPDTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYLF ISHDLAVVKALSHQLMVVKHGQVVEQGDAQSIFAAPQHPYTQQLLEAAFLAPATAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-76 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-76 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-76 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-76 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-93 | 41 |
