|
Name : PputUW4_02877 (PputUW4_02877) Accession : YP_007029877.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : Orn/Lys/Arg decarboxylase family protein Function : - COG functional category : - COG ID : - EC number : 4.1.1.19 Position : 3380212 - 3382467 bp Length : 2256 bp Strand : - Note : [E] COG1982 Arginine/lysine/ornithine decarboxylases DNA sequence : ATGTATAAAGATTTGAAATTCCCGGTCCTGATTGTCCATCGCGACATCAAGGCCGACAGCGTCGCCGGCGACCGCGTGCG GGGGATTGCTCGTGAGCTGGAGCAGGAAGGGTTCAGCGTCGTTTCGGCGGTGAACTACACCGAAGGACGACTGGTGGCGT CGACGTACCATGGCCTGTCCTGCATGCTGATAGCGTCTGAGGACGCCAGCACCCATTCCCATTTATTGCAAAACATGGCC GAACTGATCGGTCTGGCGCGGGTGCGTGCGCCGGATCTGCCGATCTTCGCCCTCGGCGAAAAAGTGACCCTGGAAAACGC TCCCGCCGATGCCATGGCCGAGCTCAACCAGTTGCGCGGCATTCTTTACCTGTTTGAAGACACCGTGCCCTTTCTTGCCC GGCAGGTGGCCCGTGCTGCGCGCAAGTACCTTGATGGCCTGTTGCCGCCATTCTTCAAGGCCCTGGTGCAGCACACCGCG GATTCCAACTATTCCTGGCACACCCCCGGTCACGGCGGTGGCGTGGCGTATCACAAAAGTCCGGTCGGGCAGGCGTTTCA CCAGTTTTTCGGGGAAAACACCCTGCGCTCGGATCTTTCGGTGTCGGTGCCGGAGCTCGGGTCCTTGCTCGATCACACCG GCCCCCTGGCTGAAGCCGAGGCCCGTGCAGCCCGTAATTTCGGCGCCGATCACACCTTTTTCGTGATCAATGGCACGTCC ACGGCCAACAAGATTGTCTGGCACTCGGTGGTCGCTCGCGATGACCTGGTGCTGGTGGATCGCAATTGCCACAAGTCGGT GCTGCACTCGATCATCATGACCGGCGCGATCCCGCTGTACTTGTGTCCGGAGCGTAATGAGCTGGGGATCATCGGCCCGA TTCCCCTGAGCGAGTTCAGCCGCGAATCGATCCAGGCCAAGATCGACGCCAGCCCGCTGACCAAGGGGCGTGCACCGAAG GTCAAGCTCGCCGTAGTGACCAATTCGACCTATGACGGCCTTTGCTACAACGCCGAGCTGATCAGGCAGCAACTGGGCAG CAGCGTCGAGGTATTGCACTTCGACGAGGCCTGGTACGCCTATGCGGCGTTCCATGAGTTTTTTGCCGGGCGCTACGGCA TGGGCACGTCCCGTGATGAAGGCAGTCCGTTGGTGTTCACCACCCATTCCACCCACAAGTTGCTGGCGGCCTTCAGTCAG GCGTCGATGATTCACGTTCGCGACGGCGGCGCGCGGCAACTGGACCGGGATCGCTTCAACGAAGCGTTCATGATGCACAT CTCGACCTCGCCGCAGTACGGCATCATCGCCTCGCTGGATGTGGCTTCGGCGATGATGGAAGGGCCGGCGGGGCGTTCGC TGTTGCAGGAAATGTTCGACGAAGCCCTGAGTTTTCGCCGGGCGCTGGCTAACTTGCGCCAGCACATTGCCGCTGATGAC TGGTGGTTTTCGATATGGCAACCGCCGTCGGCAGAAGGCATCGAGCGGGTCGTCACCGAGGACTGGTTGCTGCAGCCGGA GGCCGACTGGCACGGCTTTGGCGGCGTGACCGACGATTATGTGCTGCTCGACCCGATCAAGGTCACGCTGGTGATGCCGG GGCTGACGGCCGGTGGCGCCCTCAGCGAGCGCGGGATTCCGGCGGCGGTGGTCAGCAAGTTCCTTTGGGAGCGTGGCCTG GTGGTTGAGAAGACCGGGCTGTATTCGTTCCTGGTGTTGTTCTCCATGGGCATCACCAAGGGCAAGTGGAGCACGCTGCT CACCGAATTGCTGGAGTTCAAGCGCAGTTATGACGCGAACGTCAGCCTGGCCAGTTGCCTGCCTTGCGTGGCGCAGGAGA ATGTCGCGCGGTATCAGGGCATGGGCCTGCGTGATCTGTGCGATCAGTTGCATGCCTGTTATCGCAGCAATGCCACCGCC AGGCACCTCAAGCGCATGTACACCGTACTGCCAGAGGTCGCGATGAAGCCGGCGGACGCCTATGATCAATTGGTGCGCGG TGAAGTCGAAGCCGTATCGATCGATGCGCTGCACGGACGGATCGCCGCGGTGATGCTGGTGCCGTATCCGCCCGGCATTC CGTTGATCATGCCGGGTGAACGCTTTACCGAGTCGACCCGCTCGATCATCGATTACCTGGCGTTTGCCCGCACGTTCGAT AGCAGTTTTCCGGGGTTCGTTGCTGATGTGCACGGATTGCAACACGAAGATCAGGGCACTGGGCGGTGCTACACCGTCGA TTGCATCAAGGAGTGA Protein sequence : MYKDLKFPVLIVHRDIKADSVAGDRVRGIARELEQEGFSVVSAVNYTEGRLVASTYHGLSCMLIASEDASTHSHLLQNMA ELIGLARVRAPDLPIFALGEKVTLENAPADAMAELNQLRGILYLFEDTVPFLARQVARAARKYLDGLLPPFFKALVQHTA DSNYSWHTPGHGGGVAYHKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS TANKIVWHSVVARDDLVLVDRNCHKSVLHSIIMTGAIPLYLCPERNELGIIGPIPLSEFSRESIQAKIDASPLTKGRAPK VKLAVVTNSTYDGLCYNAELIRQQLGSSVEVLHFDEAWYAYAAFHEFFAGRYGMGTSRDEGSPLVFTTHSTHKLLAAFSQ ASMIHVRDGGARQLDRDRFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLLQEMFDEALSFRRALANLRQHIAADD WWFSIWQPPSAEGIERVVTEDWLLQPEADWHGFGGVTDDYVLLDPIKVTLVMPGLTAGGALSERGIPAAVVSKFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDANVSLASCLPCVAQENVARYQGMGLRDLCDQLHACYRSNATA RHLKRMYTVLPEVAMKPADAYDQLVRGEVEAVSIDALHGRIAAVMLVPYPPGIPLIMPGERFTESTRSIIDYLAFARTFD SSFPGFVADVHGLQHEDQGTGRCYTVDCIKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 6e-127 | 44 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 3e-125 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PputUW4_02877 | YP_007029877.1 | Orn/Lys/Arg decarboxylase family protein | VFG1670 | Protein | 4e-127 | 44 |
