Gene Information

Name : PputUW4_02814 (PputUW4_02814)
Accession : YP_007029814.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3301840 - 3302340 bp
Length : 501 bp
Strand : -
Note : [O] COG2077 Peroxiredoxin

DNA sequence : 
ATGGCTCAAGTCACTCTTAAAGGCAACCCGGTTCAAGTCAACGGCCAACTGCCACAAGCCGGTTCCAAGGCGCCAGCCTT
TTCCCTGGTTGCCGGCAATCTGTCCGACGTCACCCTTAAAGACTTTGCAGGCAAGCGCAAAGTGCTGAACATCTTCCCAA
GCGTTGACACCCCGACCTGCGCCACTTCCGTGCGCAAGTTCAACGCCCAGGCCAGCGACGTGGCCAACACTGTTGTGCTG
TGCATCTCCGCTGACCTGCCGTTCGCCCAGGCCCGCTTCTGCGGCGCCGAAGGCCTGGAAAACGTACAGAACCTGTCGAC
CCTGCGCGGCGCAGAGTTCATCCAGAACTACGGCGTGGCCATCGCCGACGGCCCGCTCAAGGGCCTGACCGCTCGCGCCG
TCGTGGTTCTGGACGAGAACGACAACGTGCTGCACAGCGAACTGGTTGGCGAAATCGCTGACGAGCCGAACTACGACGCG
GCACTTGCTGTTCTGAAGTAA

Protein sequence : 
MAQVTLKGNPVQVNGQLPQAGSKAPAFSLVAGNLSDVTLKDFAGKRKVLNIFPSVDTPTCATSVRKFNAQASDVANTVVL
CISADLPFAQARFCGAEGLENVQNLSTLRGAEFIQNYGVAIADGPLKGLTARAVVVLDENDNVLHSELVGEIADEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-36 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-36 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-37 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 7e-37 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputUW4_02814 YP_007029814.1 thiol peroxidase VFG0087 Protein 3e-37 46