Gene Information

Name : PputUW4_02572 (PputUW4_02572)
Accession : YP_007029572.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 3002123 - 3003643 bp
Length : 1521 bp
Strand : -
Note : [C] COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGAACTACGCCCAACCAGGCACGGCCGGTGCCATCGTTTCCTTCAAGTCCCGCTACGGCAACTACATCGGCGGTGAGTT
CGTCGCGCCGGTCAAAGGTCAGTACTTCACCACCACCTCGCCGGTGAATGGTCAACCTATTGCCGAGTTTCCCCGCTCCA
CGGCCGAAGACATCGACAAGGCCCTGGACGCTGCCCACGCAGCTGCCGATGCCTGGGGCAAGACCTCGGTGCAGGACCGC
TCGCTGGCGCTGCTGAAAATCGCCGACCGCATCGAGCAGAACCTCGAACTGCTGGCCGTCACTGAAACCTGGGACAACGG
CAAGGCCGTGCGTGAAACGCTGAACGCCGACATCCCGCTGGCCGTGGACCACTTCCGCTACTACGCCGGTTGCATCCGCG
CGCAGGAAGGCAGCTCGGCGGAAATCAACGAACACACCGCGGCCTATCACTTCCATGAGCCGTTGGGCGTGGTCGGCCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCGTGGAAACTCGCCCCGGCCCTGGCTGCCGGTAACTGCGTGGTGCT
CAAGCCCGCCGAGCAGACCCCGCTGGGCATCACCGTGCTGGTCGAACTGATCGGCGACCTGCTGCCACCGGGCGTGCTGA
ACATCGTGCAAGGCTTCGGCAAAGAAGCCGGCGAAGCCCTGGCCACCAGCAAACGCATCGCCAAGATCGCCTTCACCGGC
TCGACCCCGGTCGGCTCGCACATCATGAAATGCGCCGCCGAAAACATCATTCCGTCCACCGTGGAGCTGGGTGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGAAGGCCGAACCGTCCTTCATCGAGAAAGCCGCCGAAGGCCTGGTGCTGGCGT
TCTTCAACCAGGGCGAAGTCTGCACCTGCCCGTCCCGCGCTCTGGTGCAGGAGTCGATCTACGACGAGTTCATGCAAGTG
GTGATGAAGAAGGTCCTGCAAATCAAACGCGGCGACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCGTCCGAGCA
GCAATTCGACAAGATCCTTTCGTACCTGGAAATCGCCAAGGGCGAAGGGGCCGAGTTGCTGACCGGCGGCAAGGTGGAAA
AACTCGAGGGCAACCTGGCGAGCGGGTATTACATCCAGCCGACGCTGCTCAAGGGCACCAACAAGATGCGCGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTGAGCATCACCACCTTCAAGGACGAAGCCGAAGCCCTGGCCATCGCCAACGACACCGA
GTTCGGCCTCGGCGCCGGCCTCTGGACCCGCGACATCAATCGCGCCTACCGCATGGGCCGCGCCATCAAGGCCGGTCGTG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCACGCCGCGTTCGGCGGGTACAAGAAGTCCGGCGTCGGCCGTGAAACC
CACAAGATGATGCTTGATCACTATCAGCAGACCAAAAACCTGCTGGTGAGCTACGACATCAATCCGTTGGGCTTCTTCTA
A

Protein sequence :
MNYAQPGTAGAIVSFKSRYGNYIGGEFVAPVKGQYFTTTSPVNGQPIAEFPRSTAEDIDKALDAAHAAADAWGKTSVQDR
SLALLKIADRIEQNLELLAVTETWDNGKAVRETLNADIPLAVDHFRYYAGCIRAQEGSSAEINEHTAAYHFHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLVELIGDLLPPGVLNIVQGFGKEAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMKAEPSFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYDEFMQV
VMKKVLQIKRGDPLDTDTMVGAQASEQQFDKILSYLEIAKGEGAELLTGGKVEKLEGNLASGYYIQPTLLKGTNKMRVFQ
EEIFGPVVSITTFKDEAEALAIANDTEFGLGAGLWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-148 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-155 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-155 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-155 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-154 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PputUW4_02572 YP_007029572.1 aldehyde dehydrogenase VFG0082 Protein 3e-148 65